| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3640 |
|---|
| Symbol | |
|---|
| ID | 5060115 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 4168206 |
|---|
| End bp | 4168820 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640475895 |
|---|
| Product | low molecular weight phosphotyrosine protein phosphatase |
|---|
| Protein accession | YP_001160449 |
|---|
| Protein GI | 145596152 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0394] Protein-tyrosine-phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGCCGT TTACCGTTCT CCACGTCTGT ATGGGCAATA TCTGTCGCTC TCCGATGGCT
GAGCGACTGC TGGTCTTGGC TGCCCGGGAG CGGCTGGCGC GGCGCGGTGA CGCCGCACCG
GGGCTCGTCG ATGATCTGCT GCACAGTCAC AGCGCCGGCA CCGGCGGCTG GCACGCCGGT
GAGGAGATGA ACCCGCCGGC GGCCCGACAG GTGACCGGGC GGGGCGGTGA CACGGAGGGC
TTCGCGGCCC GCAAGCTGCG TTCGGAGTAT ATCGACGCCG CTGACCTGGT GCTTACCGCG
ACCGCCGATC AGCAGGAGTT CGTGTCGGTG TTACGTCCGG ACGCGGGCTC CCGCACCTTT
GTGCTGGGTG AGTTCGGCCG CTTGCTGCCC GCGGTGGACC TGGCTGGTCT GCCGGCGGCC
GGGGTGACCC CCGCCGCCGT GTACGCGCGC GGCGTGGCGC TGGTCGAGGC GGTCGACGCC
GTTCGGGCGG GGGCTGGGCC GCTGGCCGCG GATGACCTCG ACGACCCGTG GGGGCGGGGC
GACCAGTGCT TCGGCCGGGT CGCGGACGAG GTCGAGGAGA CGGTGCGTCC GCTGGCGGCG
GCGCTGTTGC CGTAA
|
|---|
| Protein sequence | MPPFTVLHVC MGNICRSPMA ERLLVLAARE RLARRGDAAP GLVDDLLHSH SAGTGGWHAG
EEMNPPAARQ VTGRGGDTEG FAARKLRSEY IDAADLVLTA TADQQEFVSV LRPDAGSRTF
VLGEFGRLLP AVDLAGLPAA GVTPAAVYAR GVALVEAVDA VRAGAGPLAA DDLDDPWGRG
DQCFGRVADE VEETVRPLAA ALLP
|
|---|
| |