| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3633 |
|---|
| Symbol | |
|---|
| ID | 5060108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 4162443 |
|---|
| End bp | 4163267 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640475888 |
|---|
| Product | ATP synthase F1, delta subunit |
|---|
| Protein accession | YP_001160442 |
|---|
| Protein GI | 145596145 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) |
|---|
| TIGRFAM ID | [TIGR01145] ATP synthase, F1 delta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.254759 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGCCG CCACCAGCCG GGAGTCGTAC AAGATCGCGG CCGACCGCCT CGACGAGTAC
GTCCGGGGCG CGGAGTCTTC GGCGGTGGCC ACCACCGCCG AAGATCTTCT CTCCGTCGCC
GACCTGCTCC GGCGTGAGCC ACGGCTACGT CGGGCCCTCG TTGACCCGGC TCGCTCCGGT
GCGGACCGGG CGGACCTGCT CGCCGGAATC CTCGGCGGGA AGGTCGGCGG GGACGCGCTC
GACCTGCTGA CCACCCTGGT CTCACATCGT TGGTCGGCCC CGTCGGAACT CCTCGACGGC
GCCGAGCGGC TCGGTGTGGC CGCGCTGCTG GCCGCTGCGG ACAAGGCGGG CGACCTCGGC
GAGGTCGAGG ACGAACTGTT CCGTTTCGGT CAGGTCGTGG CCGGCCAGTC GACGCTCTCC
AACGTGCTGT CGGACCCGGC GGCCCCGGCC GCGCAGCGGG CCACCCTCGC CGGTGAGCTG
CTCGCCGGCA AGGCCCGCCC GGTCACCGTC CGGCTGGTCG AGGTGGCGCT GGGTGGGTTC
GGCGGACGCT CCTTCGTCGG GGCACTCACC CGGTTGGTCG AGCTCGCCGC CGACCAGCGG
GACCGACAGG TGGCGTACGT GACCGTCGCG GCCCCGTTGG GTGCGGAGGA GGAGCGACGC
CTGGTCGCCA GCCTCTCTGC CATCTACGGT CGCGAGGTGA CCGTCAAGCA GTCGGTCAAC
CCCGAGGTCC TCGGTGGTGT CAGCGTCCAG GTTGGTTCCG ACCTGTACGA CGGTACCGTC
CTGCGTCGTC TCAACGAATC CCGTAACGCG CTCGCTAAGC GCTGA
|
|---|
| Protein sequence | MQAATSRESY KIAADRLDEY VRGAESSAVA TTAEDLLSVA DLLRREPRLR RALVDPARSG
ADRADLLAGI LGGKVGGDAL DLLTTLVSHR WSAPSELLDG AERLGVAALL AAADKAGDLG
EVEDELFRFG QVVAGQSTLS NVLSDPAAPA AQRATLAGEL LAGKARPVTV RLVEVALGGF
GGRSFVGALT RLVELAADQR DRQVAYVTVA APLGAEEERR LVASLSAIYG REVTVKQSVN
PEVLGGVSVQ VGSDLYDGTV LRRLNESRNA LAKR
|
|---|
| |