Gene Strop_3616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3616 
Symbol 
ID5060091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4143467 
End bp4144267 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content73% 
IMG OID640475871 
Producthypothetical protein 
Protein accessionYP_001160425 
Protein GI145596128 
COG category[R] General function prediction only 
COG ID[COG2945] Predicted hydrolase of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACAC CTATCCGCGC CTCGTCGATC CTGCCCGGCC GCCGGGAGGA GATTGAGCTG 
CACACCGCCG ACGGGCTGCG TCTCGTCGGT GAGCTGGCCC GCCCGGCCGA CCGCGCGCCG
GTCGCTACGC TGGTCTGCCT GCATCCGCTG CCCACCCATG GCGGGATGAT GGACAGCCAC
GTGTTCCGCA AGGCCGCCTG GCGCCTGCCG GCCCTGGCCG ACCTGGCGGT GCTGCGCTTC
AACACCCGGG GCACGACCAG CATGCGCGGT ACCAGCGCGG GGACATTCGA CAACGCGGTC
GGCGAGCGGT ACGACGTCGC CGCCGCCATC GAGTACGCGG AGTTCCACGA GCTGCCGGAG
ATCTGGCTGC TGGGTTGGTC GTTCGGCACC GACCTGACTC TGCGGTATGG CTGTGACCCG
GCGGTGGCGG GCGCCCTCCT GCTCTCCCCG CCGCTGCGGT TCTCCGGCCC CGGAGACCTG
GCGAACTGGG CTGCCGCCGG CAAGCCGATG ACGGCGCTGG TGCCGGAGTT CGACGACTAC
CTGCGGCCCG AGGAGGCGCG GGAACGCTTC GCGGCCGTAC CGCAGGCTGA GGTGGTCGGA
GTGCCCGGCG CCAAACACCT GTGGGTCGGT GACGCCGAGA CCGTCCTCGA CGAGATCGTC
CGGCGGGTCA ACCCCTCCGT CCCCGTGCCG CTGCCGACCA CCTGGGACGG CCCGCTGGAG
ACCGGCGATG TCAGCGCGTA CGCCGATCGC ACGGTGGCGG CCTTCGCCGA CCGGCCGGTG
CCGGGGCCAG CGGCAGACTA G
 
Protein sequence
MSTPIRASSI LPGRREEIEL HTADGLRLVG ELARPADRAP VATLVCLHPL PTHGGMMDSH 
VFRKAAWRLP ALADLAVLRF NTRGTTSMRG TSAGTFDNAV GERYDVAAAI EYAEFHELPE
IWLLGWSFGT DLTLRYGCDP AVAGALLLSP PLRFSGPGDL ANWAAAGKPM TALVPEFDDY
LRPEEARERF AAVPQAEVVG VPGAKHLWVG DAETVLDEIV RRVNPSVPVP LPTTWDGPLE
TGDVSAYADR TVAAFADRPV PGPAAD