| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3614 |
|---|
| Symbol | |
|---|
| ID | 5060089 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 4139699 |
|---|
| End bp | 4142128 |
|---|
| Gene Length | 2430 bp |
|---|
| Protein Length | 809 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640475869 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001160423 |
|---|
| Protein GI | 145596126 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.765389 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAACG GCGAGGAACT GTTCGCTCTC GGCGGGGATG TGACCACGGA GCCCAGCTTC
GAGGCCGGCC TGCGGGGGTA CGTGAAGGGA CAGGTCGACC GGTACGTCGC TCGCGCCGAG
CACGAGATCG CCACCCTGAC CGCCGAGCGA GAGCAGGCCT ACACCCAAAT TCACAAGCTG
GCCGGCCAGG TGGAAGTGCT CCAGCGGGAT CTCGCCCAGG TGCGCAAGCA GGTCGGCATG
GTGGACCGCG CCTCCTTCCG GCACCTTGGA CCCCGCGTCG AGCAGGTCCT CACCCTCGCT
GAGGAACAGG CCGATGAGAT CCTTGCCGCC GCGAACAAGG AGATCGAGTC CCGCCGAGCC
GCCGCCGAGC ACCTCATCGA CGAGGCGCGG GCGGAGGCGG CCACAGCACT CAAGGACTTC
GAGCTGGCGC TGGCCGCCCG CCGCGCCGAG GAGGAGCGGC ACACCGCAGC CCGGAAGGCG
GAAGCAGACG CCATGGTCCG GGCCGCCACG GAACAGGCAG ACGCCACCGT CAAGGCCGCC
ACCGAACAAG CAGACGCCAC CGTCAAGGCC GCCACCGAAC AAGCAGACGC CACCGTCAAG
GCCGCCACCG AGGAAGCAGA CACCGCCGTC CGGGCCGCCA CCGAACAAGC AGACACCGCG
GTCCGGGCCG CCACCGAGGA AGCCGCCCGA CTACGCAAGA CCGCGACCGA ACAAGCAGAC
ACCGCGGTCA AGGCCGCCAC CGAGGAAGCC GCCCGACTAC GCAAGACCGC GCAGGAGGCG
CTGGCGAAGG CCCAGCAGGA AGCTACCCAG CTGCGGGACA CCGCGAAAGA GGTGCACACG
CGGGCCCAGC AGGAGGCGAC GAAGCTGCGC GAAGCGGCCC GCGAGGCGCA GGCCAAAGCC
CAGCAAGAGG CAACCGAGCT GCGGGAGAGC GCCAAGGAGG TGCACGCCAA GGCGCAGGAG
GAGGCCGGGC GCCTCGTGGG GCAGGCGACC GAGGCGAGCC GGGCTACCCA CGCCAAGGCC
CAGCAGGAGG CCAAGCAGAT CATCGACGAC GCCAGCATCG CCGGCCGGAC CACCCACAAC
AAGGCCCGTC AGGAGGCGGA GCGGCTTTCC AAACAGGCCG CCGACGCGGC GAAGCGCCAG
CGCGCCGAGG CCGAGGCGTA CGCGCAGCAG ACGCGCACCG AGACCGAGGC GTATGCCCGG
CAGACCCGGG CTCAGACACA GCAGGAGCTG GGAGCCTGGC GGGCGGGGGT GGAAAAGGAG
GTCAACAACC GCCGAGCGGC GGCAGACCAG GAGTTGGCCC AGCGTCGCGC CGTCGACGAC
CAGGAGTTTG CCAGCCGCCG CGACGAGTTG GAGAAGCGGC ACGCGTCACG GCACGCCGAG
CTGGAGCAGC AGTACACATC CCGACAGCAG GAGCTGGAGA CCGGGTTCAC GACCCGACAG
CAGGAGCTGG AGACCGGGTT CACGACCCGA CAGCAGGAGC TGGAGACCGG GTTCGCCACC
CTTCAGCAGG AGCTGGAGAC CGGGTTCGCC ACCCGACAGC AGGAGCTGGA GACCGGGTTC
ACCACCCGAC AGCAGGAGCT GGAGACCGAG TTCACCTCGC GCAAGACCGA GTTGGAGTCC
ACGTACACGG CCCGCCGAAA CGAAATCGAG GGTGCCGCCG AGAGCATCCG GCGGACCGCC
GAGCAGGACG CCGGGGCCCT ACGCGAGCGT GCGGAACAGG AAGCGTCGGA GCTGCTCAGC
CAGGCTGAGG AGGCGGCGGC CGAGCAGCGC CGCTCCGCTG ACGAGTACGT CGCCACCTCC
CGCCGCCAGT TCGAGGAGTA CGCCGCTACC ACCCAACAGG CCCTGGCCAC CACCCAGCAG
CACCTGGCGG CGACGCAACA GGAGGCCGCA ACCGGCCGGC AGCAGCTCGC CCAGGTGATG
CTGGAGATCG CGCAAGCGCA GCAGCAGCTC GCTGATCTGC GGCAGGAGAC CTGGCGATCG
CGCCAGGAGT CCGACGACTT GCGGCGGCAG GTGACGGAGC TTCGGCTGGA GTTGACCGAT
GCGGCGAAGC CCGCCCCGGT CGGCCCCGCG GGCAGCGATT CCGACAGCAG TCGGGCACCC
ACGGCCGTAC CGGCGCCGCC AGATGGGGAC CGGGCCGGGG TGGGCAAGGT CGAGCCGGCG
GAGGCCGGCC AGCCGGCCCG TGGGCGGATC GAGCCGGCGG TCGACGAGTC CGCGAAGGGC
AGTGTGAAGT CGGTCACCAC GAAGGACGGT GATGAGGCCA GCGCCGGGGT AGACGGTGAG
CCGACCGTCG CGGCCGTACC GGGTGAAGGG GGTCGGGCAG CCGCCCCAAC AAAGATCACC
AGCACCGGCG AGAACACCAG CCGGCCGGCA AAGCCGACCA CCGACGAGCG CAGCTCCAAG
CCGAGCAAGG TCGTCGTTGA CAAGGACTGA
|
|---|
| Protein sequence | MSNGEELFAL GGDVTTEPSF EAGLRGYVKG QVDRYVARAE HEIATLTAER EQAYTQIHKL
AGQVEVLQRD LAQVRKQVGM VDRASFRHLG PRVEQVLTLA EEQADEILAA ANKEIESRRA
AAEHLIDEAR AEAATALKDF ELALAARRAE EERHTAARKA EADAMVRAAT EQADATVKAA
TEQADATVKA ATEQADATVK AATEEADTAV RAATEQADTA VRAATEEAAR LRKTATEQAD
TAVKAATEEA ARLRKTAQEA LAKAQQEATQ LRDTAKEVHT RAQQEATKLR EAAREAQAKA
QQEATELRES AKEVHAKAQE EAGRLVGQAT EASRATHAKA QQEAKQIIDD ASIAGRTTHN
KARQEAERLS KQAADAAKRQ RAEAEAYAQQ TRTETEAYAR QTRAQTQQEL GAWRAGVEKE
VNNRRAAADQ ELAQRRAVDD QEFASRRDEL EKRHASRHAE LEQQYTSRQQ ELETGFTTRQ
QELETGFTTR QQELETGFAT LQQELETGFA TRQQELETGF TTRQQELETE FTSRKTELES
TYTARRNEIE GAAESIRRTA EQDAGALRER AEQEASELLS QAEEAAAEQR RSADEYVATS
RRQFEEYAAT TQQALATTQQ HLAATQQEAA TGRQQLAQVM LEIAQAQQQL ADLRQETWRS
RQESDDLRRQ VTELRLELTD AAKPAPVGPA GSDSDSSRAP TAVPAPPDGD RAGVGKVEPA
EAGQPARGRI EPAVDESAKG SVKSVTTKDG DEASAGVDGE PTVAAVPGEG GRAAAPTKIT
STGENTSRPA KPTTDERSSK PSKVVVDKD
|
|---|
| |