| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3613 |
|---|
| Symbol | |
|---|
| ID | 5060088 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 4138254 |
|---|
| End bp | 4139537 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640475868 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001160422 |
|---|
| Protein GI | 145596125 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03544] DivIVA domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.61062 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCAGC AGCAGTCCTC CCCTCTTGCG TTCTTCGATA ATGCGAACAG CCAGCCGGAC
TTCACCGTCG GCCTACGTGG TTACAACACC GGGCAGGTTG ACGACTTCCT TGGTCGGCTG
ACGGCCGCGC TGACCCAGTC CGAGCAGGCC CGTGCCGAGG CCGAGCAGCG GATGAACGAC
GCGCAGCGTC GGCTCCGCCA GGCCGAGCAG CGGATGACCG CCCTCGACCA GAAGCTCTCC
GAGGCCAGCA AGCAACTCGA AGAGAACAAT CGGCCGACCC TCTCCGGCCT CGGTACCCGC
GTCGAGCAGA TCCTCCGGCT TGCCGAGGAA CAGGCCAACG ACCACCGCAG CGACGCGAAG
CGTGAGTCCG AGGGCATTCT CTCCGCCGCC CGCCTCGAGG CCCGGGAGAT CACTGACAAG
GCGCGGGCCG AGGTGGCGGC GATGAAGGCC ACCGCGGAGC GGGAGGCGGG CAACGTCCGC
ACCGCAGCGG AGCGGGAGGC CGCCGAGGTC CGCGTCCAGG CCCGCCGCGA GGCCGACACC
CTGCGCTCCG ACGCCGATCG GGAGACCAAG CAGCTGCGCA CCGTGACCGC GCACGAGGTC
GCCGAGCTGA AGTCCACCGT CGAGCGGGAG GTGTCCACCC TCCGCGCGAC CGCGGAGCGG
GAGATCACCC AGCAGCGGGC GAAGGCCGCC CGCGAGGCCG AGGAGAAGCG CGCCGAGGCG
ACGAAGCTCC TCACCGATGC ACGCGACAAG CGCGACAAGG ACCTCCAGGC CCTTGAGCTG
CAGCTGGCCG AGCGGCGGGA GAAGGCCGAG CGCGAGGAGT CGGAGCGGCA CGCAACCCAG
GTCGCCCAGA CCCAGAAGTT GGTCAACGAG GCCGAGGAGC GGGCACGGGC TGCCCAAGAG
CGGGCCAAGG AGATCGAGCA GCGCGCCGAA GCGCGGCGGG TCGAGTCGGA ACGCACCGCC
CACGACACGG TCGAAGAGGC CAAGTCGGTC GCCGAAAAGA GTCTGAACGA AGCGAAGACC
GAGGCGGAGC GCCTGCTCAC CGAGGCCCGC ACCGAGGCCG ACCTGGCTAC TCAGACGGCA
CGCCGCGAGG TCGAGGATCT GACCCGTCAG AAGGACGCGG TCACCTCCCA GCTCGGCCAG
ATGCTCTCCG GGCTCGCCGG CATCGTCCCG GGCACGGGAC CGGACGCCTC CGCTGCGGCA
GCCGTGGCAG CGGCCGCCAC GGAGACGAAG ACAAAGGCCG CGGCGGAGAC GGAGCACCGC
AAGAGCGCCG AATCCTCCAG CTGA
|
|---|
| Protein sequence | MPQQQSSPLA FFDNANSQPD FTVGLRGYNT GQVDDFLGRL TAALTQSEQA RAEAEQRMND
AQRRLRQAEQ RMTALDQKLS EASKQLEENN RPTLSGLGTR VEQILRLAEE QANDHRSDAK
RESEGILSAA RLEAREITDK ARAEVAAMKA TAEREAGNVR TAAEREAAEV RVQARREADT
LRSDADRETK QLRTVTAHEV AELKSTVERE VSTLRATAER EITQQRAKAA REAEEKRAEA
TKLLTDARDK RDKDLQALEL QLAERREKAE REESERHATQ VAQTQKLVNE AEERARAAQE
RAKEIEQRAE ARRVESERTA HDTVEEAKSV AEKSLNEAKT EAERLLTEAR TEADLATQTA
RREVEDLTRQ KDAVTSQLGQ MLSGLAGIVP GTGPDASAAA AVAAAATETK TKAAAETEHR
KSAESSS
|
|---|
| |