| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3599 |
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| Symbol | |
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| ID | 5060074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 4114968 |
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| End bp | 4117493 |
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| Gene Length | 2526 bp |
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| Protein Length | 841 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640475854 |
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| Product | nitrate and nitrite sensing domain-containing protein |
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| Protein accession | YP_001160408 |
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| Protein GI | 145596111 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.487934 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACACCC GCGACTGGCC GATCCGCGCC AAGCTGACCG CACTGGTCGT GGCGCCGGTG
ACCGCGCTTC TCACACTTTG GATCTTCGCC ACCACCCTCA CCTATGGGCC CGCACAGAGC
CTGCTCGCCG CCCGCACCCT CCTCAACGAG TTCGGGCGGC CCGGCGAGGC GGTCGTCGCC
GAGCTGCAAC GCGAGCGTCG CCTCTCGGTC GTGTACCTGG CTGCCGAGTC TGCCCAGGTC
GACCTCGATA GCCAGCGGCG GCAGACCGAT GAGGCGATCG CCGAACTGCG TCGTCGGGCT
GCCGGCGACG ACCTTCGGGA CGCCACCAGC GACCTGCTGG ATGTTCGGTT GGACCGGCTC
CTCGTCGCGC TGGATGCGTT GCCGGCCGGG CGTGGTCAGA TTGACCGGGG AGGGGTGGAC
CGGTCCGGCG TCGTTGATCT TTACAGCGGA ATGGTCTCGT CGGCCTTCCA GGCCTTCGCG
GCGCTGTCAG CGCTGCCTGA CCCCGAGCTA CACCGGGAGG CGTTGGCGGT TACCGCGCTC
GGCCACTCCC GCGAACTGCT CGGTCAGGCC GATGCCGTGC TGGCCGGGGT GTTCGTCTCG
GGCAGCTTCG CCGAGGGCGA GCACCGGCGA CTCGTGCAGA CGATCGTCAA CCAGCGGTTC
CTTGCCGAGT CGGCGGTAGC GGACCTGCCG GCGGCGGAAC GTAGCGTGTA TCAGCAGTTG
ACCGAGCAGG CGGAGTTCCG CCGACTGGGT CAGATGCAGG ATCTCCTGAT CGAGAACACC
ACCGATCAGC CGCCGATAGC GGCTGCGAAC TGGCAGGCCG ACTACGACGC GGTCCAGCAG
GCGATGCGTG ACTACGAGTT GGACCAGGCC GACGGCTTGG CCGATCGGTC GATACCCATG
GCCGTACGCG TCTTCCTGCT GCTCGCGTCC GCCGGGCTGC TAGGCCTCAT CGCGGTCGTG
GTCTCCCTGG TGGTGGCGAT TCGGGTCGGC CGTTCCCTCG CGAGCCGGTT GGGCCGGCTG
CACACCGTAC TCGAACGGGC GGAACGTCAG CTGCCCGAAC TGGTGGCGCG GATGCGCCAC
GGTGAGACGG TGGACGTGGA ACGAGAGGCG CCGTCGGTCG ACTTCGGTAC GGACGAGATC
GGCCAGGTGG GGCGCGCCTT CACCGCGGTG CGGCGGACCG CCATTCGGTC TGCTGAGGGC
GAGGTAAACC TACGCCGTGG CCTGAACGAG GTCTTTCTCA ACATCGCCCG ACGCAGCCAG
GGGCTCGTGC ATCGCCAGCT CGCCCTGCTC GACCGGATGG AGCGGCGCAC CGAGAACCCG
GACGAGCTGG CTGATCTCTT CCAGGTCGAC CACCTCGCCA CCCGGCTGCG GCGACACGCG
GAGGACCTGG TGATCCTGGC TGGTTCGGCT CCGAGCCGGG GCTGGCGCAA TCCGGTAGCG
ATGGTTGACC TGATTCGGGG GGCGCTGTCC GAGGTTGAGG CGTACAAGCG GGTTGACATC
GGCGGGGTGC AGTCGGCAGG CCTTGTCGGC CGGACCGTGG GTGACCTGAT CCACCTGCTT
GCCGAGCTGA TCGAGAACGC CACCAGGTTC TCGCCGCCGG GGACCCGGGT CCAGGTCGTC
GGGGCGCGCA GGGTCGACGG ATACCTCTTC GAGATCACCG ACCAGGGCCT CGGCATGAGC
ACCGAGGCGC TGACGGACGC CAACTCGTTG TTGGCCTCGT CGCCAGAGTT CGACCCAACC
CGGACGGACC GGCTCGGGCT CTTCGTGGTG GCCCGGCTGG CCGCCCGGCA CGGGGTGCGG
GTCCGGCTGC GTCGGTCCGA GTCGGCTGGC CTGACCGCGG TAGTTCTCGT CCCGGACGAA
CTGGTCGCTG AGGAGCCGCT GCCCTCGGGC ATGGCCCCCG GCGAGCGAGA GCGTTCTGGT
TCTCGCGCAG TTCGGCGGGA GATGCCTGGT CGGTTGCCCA CCGGGTCGGA GCCGTTGGCG
CTCGCCAACA GCACGTCGGT CCCGACTGTC GGCGAGTCGG CCGGGACCGA TGTCGGCCCA
GCGCCCGTCG AGGTGGCCGG CGAGATCGAC GGGCTGCCGC GGCGGGTCCG CCGTCGTCCG
GCCGCGATAC CGCGGAGCCG GGTGGGCACG GCGGTGCCGC CAGGTGGTGC CACCGGGGGG
CCGGGGCAGG AACGACTGGG CAGGCCGGAA CCGGCGGGTG CCGCGGGAGC CGGCACCGAT
GGGGTGTCTC GCTCCCCGAG CGGGCCAGGC GGGGCGACCG CTGAGGGCAG GCGGTTGAGG
CCGGCTGTGG ATGGGCCGAC GGTGCGGCAG CCAGCCGTGG GCGGTCGGCA GTCACCGTCG
GCGGATCCGA CCCCCCGCTC ACCGGAGGAA GCCCGCCGGA TTATGGCGGC GCTACAAGCC
GGCACGGCGA GGGGACGTCG GGTCGCTGCC GCCCGAGTAT CAATGTCCGA GGCCGGGCCG
GGCGCTCGGC CGATCGACGC GTCGGACGGA CTCGAAATCC CGACCGCGAC TGAGAGGGAC
GCGTGA
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| Protein sequence | MNTRDWPIRA KLTALVVAPV TALLTLWIFA TTLTYGPAQS LLAARTLLNE FGRPGEAVVA
ELQRERRLSV VYLAAESAQV DLDSQRRQTD EAIAELRRRA AGDDLRDATS DLLDVRLDRL
LVALDALPAG RGQIDRGGVD RSGVVDLYSG MVSSAFQAFA ALSALPDPEL HREALAVTAL
GHSRELLGQA DAVLAGVFVS GSFAEGEHRR LVQTIVNQRF LAESAVADLP AAERSVYQQL
TEQAEFRRLG QMQDLLIENT TDQPPIAAAN WQADYDAVQQ AMRDYELDQA DGLADRSIPM
AVRVFLLLAS AGLLGLIAVV VSLVVAIRVG RSLASRLGRL HTVLERAERQ LPELVARMRH
GETVDVEREA PSVDFGTDEI GQVGRAFTAV RRTAIRSAEG EVNLRRGLNE VFLNIARRSQ
GLVHRQLALL DRMERRTENP DELADLFQVD HLATRLRRHA EDLVILAGSA PSRGWRNPVA
MVDLIRGALS EVEAYKRVDI GGVQSAGLVG RTVGDLIHLL AELIENATRF SPPGTRVQVV
GARRVDGYLF EITDQGLGMS TEALTDANSL LASSPEFDPT RTDRLGLFVV ARLAARHGVR
VRLRRSESAG LTAVVLVPDE LVAEEPLPSG MAPGERERSG SRAVRREMPG RLPTGSEPLA
LANSTSVPTV GESAGTDVGP APVEVAGEID GLPRRVRRRP AAIPRSRVGT AVPPGGATGG
PGQERLGRPE PAGAAGAGTD GVSRSPSGPG GATAEGRRLR PAVDGPTVRQ PAVGGRQSPS
ADPTPRSPEE ARRIMAALQA GTARGRRVAA ARVSMSEAGP GARPIDASDG LEIPTATERD
A
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