| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3598 |
|---|
| Symbol | |
|---|
| ID | 5060073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 4114546 |
|---|
| End bp | 4114968 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640475853 |
|---|
| Product | roadblock/LC7 family protein |
|---|
| Protein accession | YP_001160407 |
|---|
| Protein GI | 145596110 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2018] Uncharacterized distant relative of homeotic protein bithoraxoid |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.741712 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCAAT CTACCAGGCA GAATGTTGAT CTCGACTGGT TGCTCGACGA GCTGGTGGAG
CGGGTGCCGC CCGCGCGGCA GGCGGTGGTA CTCTCCGCCG ACGGTCTGCT GCTGGGGGCG
TCCGCCGGGC AGGAACGGGA CGACGCGGAG CACCTGTGTG CCCTCGCCTC TGGCCTCTCC
AGCCTGGCTC GGGGCACGAG CCGGCATGTG ACTGGTGGTC CCGTCCGGCA GACTGTCGTC
GAGATGGAAT CGGCCTTCCT GTTCGTGACC ACGGCCGGGC GGGGCGCCTG CCTCGCGGTG
GTTAGCGACG CGGACGCCGA CATTGGGCTG GTGGCGTACG AGATGGCGAT GCTGGTGACT
CGGGTGGGGG AGACGATGAG CATCCCGGCC CGGCCAACGG CGGGCGCAAG CGATGTGGGC
TGA
|
|---|
| Protein sequence | MLQSTRQNVD LDWLLDELVE RVPPARQAVV LSADGLLLGA SAGQERDDAE HLCALASGLS
SLARGTSRHV TGGPVRQTVV EMESAFLFVT TAGRGACLAV VSDADADIGL VAYEMAMLVT
RVGETMSIPA RPTAGASDVG
|
|---|
| |