Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3560 |
Symbol | |
ID | 5060035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 4079852 |
End bp | 4080823 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640475815 |
Product | hypothetical protein |
Protein accession | YP_001160369 |
Protein GI | 145596072 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTTCTC CTCGATCCGG TTCTGGTCGA CCCACCCGTC GCGTCTTCCT GCTCGGTGGG CTCGCCGCCG CCCTCGGGGT CTCGGCGTGT GGCCGTACGA CGGTCACCGG GGTCAACGAC CCCTCGACGT CGGCCGCCTC CGTCGACACA CCGACCATCC CGGTGTCGAC CGAGCTGACG GGCAGCTACT CGATCGCCGA CAGCGCCACC GGGACCCAGA TCGACGTGAC GGTCACCGGG GACAGTCGAA TCATCCGCGC CAACGGACTG CCGAACCATC CGAGGGGTAG CTTCCCGAAC GCCAACAACC CCCACACCGT CTCGGCCCAG ACGTACGAGT TCCAGCTTCC GCTGCACGGA ACGCCGGCCA GTAGCGTCAC CAGGCTGGTC CTGCCGCAGC CCTTCGGCAT CGCGATCAAC GGAGTCCCCT TCGACCCCCT CGCCGCCGAG TGGTACCGAC GGGACCCGGC GTCCGGCTGG ACGATCGAGG CGATCGGGCC CACGGCAACC CTCGGGCTGG ACGACAACAA CGCCCACGTC CAGCCGACCG GGGCCTACCA CTACCACGGC CTACCCACGG CTCTCGCCGG TCAACAGGAC GCGAGCCGCC ACTCCCCGCT GCTCGGCTGG GCCGGCGACG GCTTCCCCGT CTACGCGGGA TTCGGCTACC GCGACGCGAT GGACCCGACC TCCGGCATCA CCGAGTTGAC CTCCTCGTAC CGACTCCGCT CCGGTCTGCG ACCGGACGGC CCGGGCGGAG CGTACGACGG CACCTACACC GAGGACTTCG AGTTCGTGAC GGGCCACGGC CTGCTCGATG TGGCCAATGG TCGACGCGGG GTCACGCCCG AGTATCCCGA CGGCACCTAC TACTACGTCC TCACCGACGC GTTCCCGTTC ATCCCACGAC AGTTCGTCGG CACCCTCGCG GAGAGCTTCC GCCACTCGGG ACGCGGGGGT GGGCCTCGAT AG
|
Protein sequence | MTSPRSGSGR PTRRVFLLGG LAAALGVSAC GRTTVTGVND PSTSAASVDT PTIPVSTELT GSYSIADSAT GTQIDVTVTG DSRIIRANGL PNHPRGSFPN ANNPHTVSAQ TYEFQLPLHG TPASSVTRLV LPQPFGIAIN GVPFDPLAAE WYRRDPASGW TIEAIGPTAT LGLDDNNAHV QPTGAYHYHG LPTALAGQQD ASRHSPLLGW AGDGFPVYAG FGYRDAMDPT SGITELTSSY RLRSGLRPDG PGGAYDGTYT EDFEFVTGHG LLDVANGRRG VTPEYPDGTY YYVLTDAFPF IPRQFVGTLA ESFRHSGRGG GPR
|
| |