Gene Strop_3560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3560 
Symbol 
ID5060035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4079852 
End bp4080823 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content69% 
IMG OID640475815 
Producthypothetical protein 
Protein accessionYP_001160369 
Protein GI145596072 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCTC CTCGATCCGG TTCTGGTCGA CCCACCCGTC GCGTCTTCCT GCTCGGTGGG 
CTCGCCGCCG CCCTCGGGGT CTCGGCGTGT GGCCGTACGA CGGTCACCGG GGTCAACGAC
CCCTCGACGT CGGCCGCCTC CGTCGACACA CCGACCATCC CGGTGTCGAC CGAGCTGACG
GGCAGCTACT CGATCGCCGA CAGCGCCACC GGGACCCAGA TCGACGTGAC GGTCACCGGG
GACAGTCGAA TCATCCGCGC CAACGGACTG CCGAACCATC CGAGGGGTAG CTTCCCGAAC
GCCAACAACC CCCACACCGT CTCGGCCCAG ACGTACGAGT TCCAGCTTCC GCTGCACGGA
ACGCCGGCCA GTAGCGTCAC CAGGCTGGTC CTGCCGCAGC CCTTCGGCAT CGCGATCAAC
GGAGTCCCCT TCGACCCCCT CGCCGCCGAG TGGTACCGAC GGGACCCGGC GTCCGGCTGG
ACGATCGAGG CGATCGGGCC CACGGCAACC CTCGGGCTGG ACGACAACAA CGCCCACGTC
CAGCCGACCG GGGCCTACCA CTACCACGGC CTACCCACGG CTCTCGCCGG TCAACAGGAC
GCGAGCCGCC ACTCCCCGCT GCTCGGCTGG GCCGGCGACG GCTTCCCCGT CTACGCGGGA
TTCGGCTACC GCGACGCGAT GGACCCGACC TCCGGCATCA CCGAGTTGAC CTCCTCGTAC
CGACTCCGCT CCGGTCTGCG ACCGGACGGC CCGGGCGGAG CGTACGACGG CACCTACACC
GAGGACTTCG AGTTCGTGAC GGGCCACGGC CTGCTCGATG TGGCCAATGG TCGACGCGGG
GTCACGCCCG AGTATCCCGA CGGCACCTAC TACTACGTCC TCACCGACGC GTTCCCGTTC
ATCCCACGAC AGTTCGTCGG CACCCTCGCG GAGAGCTTCC GCCACTCGGG ACGCGGGGGT
GGGCCTCGAT AG
 
Protein sequence
MTSPRSGSGR PTRRVFLLGG LAAALGVSAC GRTTVTGVND PSTSAASVDT PTIPVSTELT 
GSYSIADSAT GTQIDVTVTG DSRIIRANGL PNHPRGSFPN ANNPHTVSAQ TYEFQLPLHG
TPASSVTRLV LPQPFGIAIN GVPFDPLAAE WYRRDPASGW TIEAIGPTAT LGLDDNNAHV
QPTGAYHYHG LPTALAGQQD ASRHSPLLGW AGDGFPVYAG FGYRDAMDPT SGITELTSSY
RLRSGLRPDG PGGAYDGTYT EDFEFVTGHG LLDVANGRRG VTPEYPDGTY YYVLTDAFPF
IPRQFVGTLA ESFRHSGRGG GPR