Gene Strop_3515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3515 
Symbol 
ID5059989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4032056 
End bp4033261 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content72% 
IMG OID640475769 
Producthypothetical protein 
Protein accessionYP_001160324 
Protein GI145596027 
COG category[S] Function unknown 
COG ID[COG4198] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTCG CCCATCCAAT CACCCGGGCC TGGATCACCA CTGGCGGCAC CGGCGCGCAG 
AACTACGACG AGTTCGCCGA CGACGCGGAG ATCACCTCGA TCATCGAGGT GAATCCGCAC
AGTGCCCTCG GCATCGAGAT GCCGCACCGG GCCCCGGAGA GCCGGGGGAA GTCCTTTCTC
GAAGCACTGC CGGAGGCGGC CGCCCGCCTC GCCGAGGCGA AGGCGGCGGG TAGCTACACC
CCAGCCGAGC AGGTGGTGGT GCTCTACCGG ATCAGTGCGC CGGAGGAAGA GCCCGCGTAC
GGGCTGTTCG TCATGGTGGA TACCGACCAG ATCTCCACCA GCGCCGCCGA GCCGGGTCTG
GTGATCCGGA ACGAGGACGT CTTCATCGCC AAGGTTCGCG AGCGGGTGGC CTTGGCCGAG
TCTCTGGGAC ATCTGTTGTC GCCGGTGCTC CTACTCCAGA CCGGTCGGGG CGACGAGCTG
CACGCCGCCC TCGCGGCAGC GGCCGACCGG GCCGGGGCGC CGGCCGCGAC GGACACCGAC
CAGGCCGGGC GGACGCATGC CATCTGGCTG GTCGGTCCGG GGGAGCAGCA GGATGAGCTG
ACCGCTCTGG CCGGCGGTGG CGAGTTGGTC GTCGCCGACG GCAACCACCG CAGCCTCGCG
GCCCAGACCG GAGGGCTACC GCGCTTCCTG GCCGTGGTCA CCACGCCGGC CTCGGTCGCC
ATCGCCCCGT ACAACCGGTT GGTCGACGAG CTCACCACCA GCCCGGCTGA GCTGATCGAC
CGGCTTCGTG CCGCCGGCGC CCAGGTCGAG CCGATCGACG GCCCGGTCGA GGTCCCGGCG
GCCGGCGGCA CCGTCCACCT CCGGCTCCCC GATGCGGCGT ACGCCGTGCG CCTGCCCCGG
GTGGGCGCGG GGCGCCTGGA GAACCTGGAC CATGCCCTGG TCGAGCGGTT GTTGCTGCGG
GACGCGCTGG GGCTGGACCC GGGCGACAAG CGGATCACCT ACGTCGGCGG CGACTACCCG
GCGAGCTGGC TCCGTGGGGA GGTCGACGCC GGCCGCGCCG AGCTGGCCGT CCTCGTCGCC
CCGGTGACCG TGGACGACTT CGTCGCGGTG AACCTGGCGC GGGAGAAGAT GCCACGCAAG
AGCACCTGGT TCACCCCGAA GGCCCGCGGC GGACTGGTCG TCGCCGAGTT GTCGTCCGGG
CAGTGA
 
Protein sequence
MTVAHPITRA WITTGGTGAQ NYDEFADDAE ITSIIEVNPH SALGIEMPHR APESRGKSFL 
EALPEAAARL AEAKAAGSYT PAEQVVVLYR ISAPEEEPAY GLFVMVDTDQ ISTSAAEPGL
VIRNEDVFIA KVRERVALAE SLGHLLSPVL LLQTGRGDEL HAALAAAADR AGAPAATDTD
QAGRTHAIWL VGPGEQQDEL TALAGGGELV VADGNHRSLA AQTGGLPRFL AVVTTPASVA
IAPYNRLVDE LTTSPAELID RLRAAGAQVE PIDGPVEVPA AGGTVHLRLP DAAYAVRLPR
VGAGRLENLD HALVERLLLR DALGLDPGDK RITYVGGDYP ASWLRGEVDA GRAELAVLVA
PVTVDDFVAV NLAREKMPRK STWFTPKARG GLVVAELSSG Q