| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3478 |
|---|
| Symbol | |
|---|
| ID | 5059947 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 3985738 |
|---|
| End bp | 3986208 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640475727 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001160287 |
|---|
| Protein GI | 145595990 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.603681 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAGC ACGCACAGGT GCGGACGAGG ACAGGGCTCC AAACCGCGGC CCTCACCGTG
GCGGTGATCT TTCTCCTGCT GGGAGTGCTC GGGTTCGTGC CGGGGATCAC CACCGACTAT
GGCGAGCTGC GGTTCGCCGG ACCCGACTCC GGGGCGAAGC TGTTTGGCCT GTTCCAGGTC
TCGTTCCTGC ACAACATCCT GCTTCTGGGC TCCGGTCTGG CCGGCCTGAT GCTGGCCCGG
CGGGTGGGCG GGGCGCGGGT CTTCCTCACT GTGGGTGGCG CCCTCACCCT CGGCCTGTGG
CTCTATGGGT TCGCCATCGA CCGGGAGAGC TCAGCCAACG TGATCCCGGT GAACGAGGCC
GACAACTGGC TACACCTCGG GGTCGGCTTC GCGATGCTCG TACTCGGCCT GCTCCTGTCC
AACCAGAAAG GCACCGGCGG CCAGCTCGAC ACCCCCTTGG ACCGGCCCTG A
|
|---|
| Protein sequence | MAEHAQVRTR TGLQTAALTV AVIFLLLGVL GFVPGITTDY GELRFAGPDS GAKLFGLFQV
SFLHNILLLG SGLAGLMLAR RVGGARVFLT VGGALTLGLW LYGFAIDRES SANVIPVNEA
DNWLHLGVGF AMLVLGLLLS NQKGTGGQLD TPLDRP
|
|---|
| |