| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3470 |
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| Symbol | |
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| ID | 5059939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3978632 |
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| End bp | 3979492 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640475719 |
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| Product | degV family protein |
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| Protein accession | YP_001160279 |
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| Protein GI | 145595982 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1307] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00762] EDD domain protein, DegV family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.748591 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGTCG CGGTTGTCAC CGACTCCACC GCCTACCTTC CCCCTGGGCT GCTGGCCATG
CACCAGCTAA CGGTGGTGCC CTTGACCGTC GTGCTCAACG GAGTGGAAGG GCGGGAGGGG
GTGGAGACCT TCCCCGCCGA CGCTACCCGA GCCCTGAGTG GGCGGCGGGT GTCGGTCAAC
ACCTCCCGGC CGGCCCCCGC GCAGTTTGTG CGCGCGTACC GCCGGCTTCT CGACGGTGGT
GCCGACGGCA TCGTCTCGGT GCATCTGTCC GCAGGGCTCT CCGGCACTGT CGAGTCCGCG
CGCCTGGCCG CCGCGGAGTT CGGCGACCGA GTGGCGGTGG TGGACAGCCG CTCCTGCGGC
ATGGGCATCG GATTTCCCGC GCTGGCTGCT ACCGAGGCCG CGGCGGCCGG TGCCGACCTG
ACCGCGGCTC GTATCGTTGC CGAGCGGGCC ATAGCGCGGA CCACCGTCTA CTTCTACGTC
GACACGCTGG AGTTCCTCCG TCGGGGTGGC CGGATCAACG CCGCCTCGGC GTTGCTCGGC
ACTGCTCTCT CAGTGAAGCC GATCATGCAC ATGCCAGACG GCGTGATCGT CCTCCGGGAC
CGGGTGCGCA CCGCCAGCCG GGGCATCGCC CGTCTGGTAG ACCTCGCTGT CGAGGCCGCC
GGGGATGCCG ATGTTGACCT GGCTCTGCAC CATCTCGCGG CACCGCAGCG CGCCGAGGCA
CTCCAGGCGG CGTTGGCCGC GCGGCTCGGT GACTGCCTGC GGAGCACCTA CGTCTCGGAG
GCCGGTGCGG TGGTCGCCGC GCATGCGGGG CCCGGCCTGG CCTGCGTGGT CGTGCATCGC
CGTCCGCCAG CCGGAGACTG A
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| Protein sequence | MPVAVVTDST AYLPPGLLAM HQLTVVPLTV VLNGVEGREG VETFPADATR ALSGRRVSVN
TSRPAPAQFV RAYRRLLDGG ADGIVSVHLS AGLSGTVESA RLAAAEFGDR VAVVDSRSCG
MGIGFPALAA TEAAAAGADL TAARIVAERA IARTTVYFYV DTLEFLRRGG RINAASALLG
TALSVKPIMH MPDGVIVLRD RVRTASRGIA RLVDLAVEAA GDADVDLALH HLAAPQRAEA
LQAALAARLG DCLRSTYVSE AGAVVAAHAG PGLACVVVHR RPPAGD
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