| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3446 |
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| Symbol | |
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| ID | 5059915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3953509 |
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| End bp | 3954321 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640475695 |
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| Product | undecaprenyl diphosphate synthase |
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| Protein accession | YP_001160255 |
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| Protein GI | 145595958 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
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| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.794901 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0362391 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCCGAT CGACCAGGCG ACGCGGCCGC GCGCCGGCGC CACCCACCCC TCATCCGTCC
GGCGCCCGGC CACCAGCGCT GCCCGCCGAG GCGTTGCCGC GGCACGTCGC GGTGGTGATG
GACGGCAACG GCCGGTGGGC CAAGGAGCGC GGGCTCCCGC GTACAAAAGG GCACGAGGCG
GGAGAGTTCT CCCTCTTCGA CGCCATCGAG GGCGCGATCG AGTTGGGTAT CCCGTACTTG
TCGGCGTACG CGTTCTCGAC GGAGAACTGG CGGCGCTCGC CAGACGAGGT GCGCTTCCTG
ATGGGCTTCA ACCGGGACGT GATCCGTCGC CGTCGTGACC AACTCGTCGA CCTGGGCGTA
CGGGTCGTCT GGTCGGGCCG GTCCGGGCGA CTGTGGAAGA GCGTCATCTC CGAGCTGCAG
GCGGCCGAGG AACTGTCCCA GGGCAACTCG ACGCTTACCC TACAGTTCTG CGTCAACTAT
GGCGGGCAGG CCGAGATCGC CGACGCCGCC GCCGCGATCG CCCGGGAGGT CGCGGCCGGC
CGGCTCGACC CGGCCAAGGT CACCGAGAAG ACTCTGGCCC GCTACCTCTA CCACCCGGAG
GTCCCCGACG TGGATCTCTT CCTGCGCCCC TCCGGAGAGC AACGCACCTC GAACTTCCTG
CTCTGGCAGA GCGCCTACGC CGAAATGGTC TTCCTGGACA CGCTCTGGCC GGACTTTGAC
CGCCGCCACC TCTGGTACGC CTGCGAGCTC TACGCCCAGC GGGACCGCCG GTTCGGCGGG
GCGCTGCCGA ACCCGGTGGC GCCTACCACC TGA
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| Protein sequence | MIRSTRRRGR APAPPTPHPS GARPPALPAE ALPRHVAVVM DGNGRWAKER GLPRTKGHEA
GEFSLFDAIE GAIELGIPYL SAYAFSTENW RRSPDEVRFL MGFNRDVIRR RRDQLVDLGV
RVVWSGRSGR LWKSVISELQ AAEELSQGNS TLTLQFCVNY GGQAEIADAA AAIAREVAAG
RLDPAKVTEK TLARYLYHPE VPDVDLFLRP SGEQRTSNFL LWQSAYAEMV FLDTLWPDFD
RRHLWYACEL YAQRDRRFGG ALPNPVAPTT
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