| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3419 |
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| Symbol | |
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| ID | 5059887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3922739 |
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| End bp | 3924883 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640475667 |
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| Product | MMPL domain-containing protein |
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| Protein accession | YP_001160228 |
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| Protein GI | 145595931 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2409] Predicted drug exporters of the RND superfamily |
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| TIGRFAM ID | [TIGR00833] Transport protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.825697 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGGA AAGGTGCGTG GGGTCGGGGC ACGCTGGTCG CCCTACTCAT CGCGCTCGCC
TGGCTGGTGG TTGGCGGCCT TGCCGGGCCG TATACCGGCC GGCTCAGCGA GGTCGCCACC
AACGACAACG CTGCCTTCCT CCCCACCGAC GCCGAGGCGA CCCGAGCCCA GGACCTCTCC
GAACTCTTCG TGGACCAACT GACCACCCCG GCGCTCATCG TCTACGAACG CACCAGCGGC
ATCACCGACG CCGACCGGCA GCAGATCGCC GCCGACACGG CCGAGATCGC CGAACTGCCC
GGCGTGGTCG GCCCGCTGCC GCCGCCGGTC CCCAGTGCGG ACGGGCAGGC GGTCCAGGTG
ATCGTCCCGG TTGATGACGA GCAGGGCGAG GAGATCGCCA ACGTCGTGGC AGAGCTGCGG
GGCGTCGTCG GCGCGGATCG AGACGGGCTC ACCATCAACG TCACCGGGCC GGCCGGCCTG
CTCGCCGACC TGATCGATGT CTTCTCGGCG ATCGACGGGA GGCTGCTGCT GGTCACCCTC
TGCGTGGTGC TCCTCATCCT GCTGGTCGTC TACCGCAGTC CCGTGCTGTG GATCTTCCCG
CTGCTTGCCG CGGGCATGTC GTTCTCGCTG GCCACCGCGA TCGTCTACCG GCTCGCCGAG
GCCGACGTCC TGACACTCGA CGGGCAGGCG CAGGGCATCC TCACCGTGCT GGTCTTCGGT
GCCGGCACCG ACTACGCCCT GCTGCTGGTC GCCCGGTACC GGGAAGAGCT ACACCGGCAC
GACCGGCCCG CCTCCGCCAT GCTGGCGGCC TGGCGCGGCT CCGCCCCGGC GATCGCCGCC
TCCGCCGGCA CCACCATCGC CAGCCTGCTC TGCCTGCTGC TCTCCAGCCT GACCTCCAAC
CAGGCCCTCG GACCGGTCGC CGCCATCGGC ATCGGAGCCA CCCTGCTGGT GATGCTCACC
CTCCTACCCG CGCTGCTCGT GCTCGGCGGA CGCCGGGCGT TCTGGCCGCG CCAGCCGCGA
CTTGACCACG CCGAGCCGCA GACCGAACAC GGCGTCTGGG GTCGCGTCGC GCGGTTCGTC
GCCCGCCGGC ACCGATCGGT GTGGCTGGTA ACCGCGTTCG CGCTGGCTGC GCTCACGCTC
GGCCTCACCC AGCTGGGCGC GACAACGCTG GGCGAGAGTG ACCTGTTCAC CGAGCGGACG
GACTCGGTCG CGGGCCAGGA GGCGATCGCC CGCCACTACC CGGCCGGCAC CGGGAGCCCG
GCCGTGATCT TCACCCGCCA GGAGACCGCC GAGCAGGTCG CCGCCGTGGC CCAGGAGACG
CCCGGAGTCG TGGCGGTACG ACCGGTCACC GACCGCCCCG GCGCCGGCCC GGGCTCGGGG
TCGGAAGACG ACTCAGAAAT GATCGAGCCG CCGAGAGTCG TCGACGGCAT CGTGCAACTT
GAGGCGACAC TCGCCGACGC GCCGGACTCC GACGGTGCCG AGGAAACCAT CCGCGAGCTA
CGGGTGGCGG TCCACGCCGT ACCCGCCGCC GACGCGGTCG TCGGCGGCGT CACCGCAATC
AACATCGACA CCGCTGACGC CTCCACCCGA GACCGCAACG TCATCATCCC GGTAGTCCTC
AGTGTCATCG CCGTTATCCT GGCGCTGCTG CTGCGTGCCC TGCTCGCCCC GTTGCTGCTC
GTCGCCACCG TGCTGCTCTC GTACGGCGCC ACGCTGGGCC TGTGCGCGCT GATCTTCAAA
TACCTCTTCG ACTTCCCCGG CGTGGACGCC TCCTTCCCGC TGTTCGCCTT CGTCTTCCTG
GTCGCCCTCG GCATCGACTA CAACATCTTC CTGATGAGCC GAATCCGGCA GGAGTCGGTG
AAGCGGGGCA CCCGCTCCGG CGTGCTGTAC GGGCTCGTCG TCACCGGAGG TGTCATCACC
TCCGCCGGTG TGGTGCTCGC CGCGACCTTC AGTGCCCTGG CCGTCCTCCC GCTGGTGGTG
CTCATCGAAC TGGGCGTGGC GGTCGCCGTG GGCGTCCTCA TCGACACGAT CATCGTCCGC
TCGCTGCTGG TGCCCGCCCT CGCGTACGAC ATAGGGTCGA AGATCTGGTG GCCGAGCCGG
CTGGCCCGGG TCGGCGGCGA ACGGGAGGCG CGCGATGCCG GTTGA
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| Protein sequence | MSRKGAWGRG TLVALLIALA WLVVGGLAGP YTGRLSEVAT NDNAAFLPTD AEATRAQDLS
ELFVDQLTTP ALIVYERTSG ITDADRQQIA ADTAEIAELP GVVGPLPPPV PSADGQAVQV
IVPVDDEQGE EIANVVAELR GVVGADRDGL TINVTGPAGL LADLIDVFSA IDGRLLLVTL
CVVLLILLVV YRSPVLWIFP LLAAGMSFSL ATAIVYRLAE ADVLTLDGQA QGILTVLVFG
AGTDYALLLV ARYREELHRH DRPASAMLAA WRGSAPAIAA SAGTTIASLL CLLLSSLTSN
QALGPVAAIG IGATLLVMLT LLPALLVLGG RRAFWPRQPR LDHAEPQTEH GVWGRVARFV
ARRHRSVWLV TAFALAALTL GLTQLGATTL GESDLFTERT DSVAGQEAIA RHYPAGTGSP
AVIFTRQETA EQVAAVAQET PGVVAVRPVT DRPGAGPGSG SEDDSEMIEP PRVVDGIVQL
EATLADAPDS DGAEETIREL RVAVHAVPAA DAVVGGVTAI NIDTADASTR DRNVIIPVVL
SVIAVILALL LRALLAPLLL VATVLLSYGA TLGLCALIFK YLFDFPGVDA SFPLFAFVFL
VALGIDYNIF LMSRIRQESV KRGTRSGVLY GLVVTGGVIT SAGVVLAATF SALAVLPLVV
LIELGVAVAV GVLIDTIIVR SLLVPALAYD IGSKIWWPSR LARVGGEREA RDAG
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