| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3393 |
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| Symbol | |
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| ID | 5059860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3893312 |
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| End bp | 3896014 |
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| Gene Length | 2703 bp |
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| Protein Length | 900 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 640475642 |
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| Product | regulatory protein, LuxR |
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| Protein accession | YP_001160204 |
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| Protein GI | 145595907 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGGTGG GGCCGGTGCC AGCGGAGCGA CGGCAGACCA CGGTGACCAC GGGACCGGGT
CCACCACTAC TGGCGTCCCG GCTGGCCCCG GGTCCACTGC CCGGACCGGT GGTGGTCCGG
CCCCGGTTGC TGCGGCGGCT TGACGAGGGG ACCGCCGTAC CGGTGACTCT CGTCGCCGCA
CCGGCGGGCT GGGGCAAGAC GACGTTGCTC ACCTCCTGGT ATCAGGCCGC CACCGGCCGG
GACCGGCCGG ATCTGGGCTG GGTCTCGGTG GAAGGCGGTG ACGACGGCGA ACGTCTCTGG
TCGTACCTGG TGGCGGCGCT GCGGCCCGCG GTGGGGCCGT CGCGATCGGC GGCGCTGGAC
GGGCCGCCCC GCCCGGACCA GCTGGAGGTG CTGGCCGCGG CGATCGCCGC CCGGGAGCGG
CCGGTGCTGC TGGTCCTGGA CGACCTACAC CGGATCACCG ACCCGGCAGC GGTCGCCGGA
TTGGAGTTCC TGCTCCGCCA CTGTGAGCAG CGGCTGCGTC TGGTGGCCGG GGCTCGCGCC
GGGGTGCCGC TGGCGGTGCA CCGGTGGCGG CTGGCCGGCG AGCTGACCGA GCTCGGTCCA
GACGACCTGG CCTTCACCGG CGACGAGGTC GCCGATCTGC TCACGGCGCA TGGGGCGGCC
CTTCCAGCGG AGGGGGTCCG GCGGCTGCGC GAGCGCACCG GTGGCTGGCC GGCGGCGCTC
CGGCTCGCCG CGCTTGCCTT GCCCGGGCAG CCGGACCCGG CCCGGTGGGT CGGGCAGCTC
GGCAGCGATC AGCCGGACAT CGCCGGCTAC CTGCGGGAGG AGGTCCTCGG CGGGTTGGAT
CCGGACGACC GGGAGCTGCT GCGTACGACG GCGATGGCGG ACGCCGCCTG CGCCGGCCTC
GCCGACGCGG TGACCGACCG CCCGGACACC GGGGCGAGAC TGGCCGAGCT GGCCGGCGTC
GGGGGCGTGC TGCGGCACGA CGACGGCCGT CCCCCCTGGT ACCGCTGCCA TCCGCTCCTG
GCCGACCTGC TCCGCGACGA ACTGGACCGG CTGCCGGCCG AACACGTGCG GGAGCTGCAC
CGGCGAGCCG CCGGCTGGTA CGCCGCTAAC GGGCGGCCCG CCGACGGCTT GCGGCACGCG
CTCACCGGCG GTGACTGGGC CGGGGCCACC GAGCTGTTCC TCACGACCTG GCCGGAGCTG
GCACCGTACG ACGGGGAGCG ACCGGCCGCA CCGCCACCAC CACCTGCCGA GACCATGGTG
CGGGACCCGG AGCTGGCCCT GGCGTGCGCG GCGGAACGCG CGTACGCGGG GGACATCTCG
GCCGCCGAGG GGTATCTGCG CTCAGCCGGG GCGGCGGGTG AACTGCCGGT GCCCCGCCGG
CAGCGCTTCG CCCGGTTGGT CGCCGCGGTG GAGCTAGCGG TGGTCCGTTG GTCCGACGAC
ATTCCGGCGG TGCGTGCCGC CGCCGCCCGG TTGCTCGCCA CCCACTCGGC GACGCGGGCG
TCCGAGGCGC CAGACCGCCC GCCGCCCGTC GCCGAGCCGC GCGGCACCAT CGTCGAGGAC
GCGGACGGGT GGGCGGTGGC GGGCACCGCG CTTGGCCTGG CCGATGTCGC CGCCGGCGAG
CTGGGCAGTG CGGAGCGGCA GCTGGAGGCG GCGTCGCTGA CCGCCCGGAC TGCCGGGTGG
GTACGAACCG AGCTGGCCGG TGCCAGCCGG GTGGCGCTGC TGCGCGCGAT CCGGGGTGCA
CTGCGACAGG CGGAGACGGG GGCCCGTACC GCGCTTGCCC TCCCGCCCTG CCAGGGGTGG
TCCTGCCGGA TCGACTGCGG GTACGCGTAC CTGGCGCTGG CCGTGGTGGC GCTGCTGCGG
GACCAGCCCG AAGAGGTGGC GGCGAACCTG GCGTTGGCGG AGCCGGCGAC CGTGGAGCCC
GTCGCCGGGG CGGTGGTGGC GCTGTGCCGA TCCCACCTGG TGCGGGACGC CGGTGACCAC
GCGGCTGGGC ACCGACTGCT CGTCGCCGCC CGGGAGCAGC TGGGCGGCTC TGAGGGGGAG
CTGGACCGGT GGCTGCGGGC CGCCGAGGCG GACCTGCGCG CGGCGCGGGG CGACCTGGAC
ACCGCCCGGG AACTGCTCGC CGGGGCGGGC CCCGAACTCG CCGTCGGCCT TGCTCGGGTG
GAGCTGCGGG CCGGGGACGA CCGGACGGCC GAAGCGGCCC TGCCCAACTG GCAGGCGGCC
GAGGCGGCGG ACTGGCCGCT ACCGGTGCGG GTGGAAGCCG CGGTGCTGCA CGTGGTGCTG
GCCGAACGGG CGGGGGATGG TCGGCGAGCA CACCGAACCC TGGAGGTCGC CCTCGACCTG
GCCGGAGAGG AGGGGGTCCG GCGGCCGTTC ACGCGCGCCG ATCCGGCGGT GCGGGACCTG
CTGGCAGCAC ATCTGGACAC CGGCACGGCG TATTGGTCGG CGGTGAGCGA CCTGGTCCGC
GGGGCGGAGG AGCCGACCGA ACGGGCCGGG CCTACCGGGG CGGCGCTGGC CGAGCCACTG
ACCGAGCGCG AGGTGACCAT CCTGCGCTAT CTGCAGAGCA TCCTCTCCAA CGTGGAGATC
GCGGCCGAGC TGTCGTTGTC AATCAACACG GTGAAGACGC ATGTTCGCAA CATCTATCGC
AAGCTCGACG CCACCCGCCG CCGGGAGGCC GTCCGTCGGG CCCGTGATCT GCGGCTGATC
TGA
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| Protein sequence | MGVGPVPAER RQTTVTTGPG PPLLASRLAP GPLPGPVVVR PRLLRRLDEG TAVPVTLVAA
PAGWGKTTLL TSWYQAATGR DRPDLGWVSV EGGDDGERLW SYLVAALRPA VGPSRSAALD
GPPRPDQLEV LAAAIAARER PVLLVLDDLH RITDPAAVAG LEFLLRHCEQ RLRLVAGARA
GVPLAVHRWR LAGELTELGP DDLAFTGDEV ADLLTAHGAA LPAEGVRRLR ERTGGWPAAL
RLAALALPGQ PDPARWVGQL GSDQPDIAGY LREEVLGGLD PDDRELLRTT AMADAACAGL
ADAVTDRPDT GARLAELAGV GGVLRHDDGR PPWYRCHPLL ADLLRDELDR LPAEHVRELH
RRAAGWYAAN GRPADGLRHA LTGGDWAGAT ELFLTTWPEL APYDGERPAA PPPPPAETMV
RDPELALACA AERAYAGDIS AAEGYLRSAG AAGELPVPRR QRFARLVAAV ELAVVRWSDD
IPAVRAAAAR LLATHSATRA SEAPDRPPPV AEPRGTIVED ADGWAVAGTA LGLADVAAGE
LGSAERQLEA ASLTARTAGW VRTELAGASR VALLRAIRGA LRQAETGART ALALPPCQGW
SCRIDCGYAY LALAVVALLR DQPEEVAANL ALAEPATVEP VAGAVVALCR SHLVRDAGDH
AAGHRLLVAA REQLGGSEGE LDRWLRAAEA DLRAARGDLD TARELLAGAG PELAVGLARV
ELRAGDDRTA EAALPNWQAA EAADWPLPVR VEAAVLHVVL AERAGDGRRA HRTLEVALDL
AGEEGVRRPF TRADPAVRDL LAAHLDTGTA YWSAVSDLVR GAEEPTERAG PTGAALAEPL
TEREVTILRY LQSILSNVEI AAELSLSINT VKTHVRNIYR KLDATRRREA VRRARDLRLI
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