Gene Strop_3391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3391 
Symbol 
ID5059858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3891746 
End bp3892108 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content65% 
IMG OID640475640 
Productanti-anti-sigma factor 
Protein accessionYP_001160202 
Protein GI145595905 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.766696 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCTGT CGATCGTAAA GTCGTTCCTA CCCCGGAGCG TCGTGGAGAT CTCGCCGCGT 
GGTGAGATCG ATGTCGACAC CGCGTACGAG GTACGTGAGG CGGTCGCGGA GATCCTGGCC
AAAGGCCGTC CTCGTCGCAT CGAGTTGAAC ATGCGGCTGG TGACCTTCAT CGACTCTGTC
GGGATCAGCG CGATGGTTGC CGGCTTCCAG ACCGCAGAGG TAAGTGGTGT GAAGCTGGTG
GTGACCGAGC CGAGCCGATT CGTGCACCGG CAGCTCTGGG TTGCTGGTCT ACTCGGACTC
TTCGGCGCCC CCGAGCCCTA CTTCGCGGGG GCCGCGGCCC CGGAGGTCCT GCCGGGGGCC
TGA
 
Protein sequence
MSLSIVKSFL PRSVVEISPR GEIDVDTAYE VREAVAEILA KGRPRRIELN MRLVTFIDSV 
GISAMVAGFQ TAEVSGVKLV VTEPSRFVHR QLWVAGLLGL FGAPEPYFAG AAAPEVLPGA