Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3391 |
Symbol | |
ID | 5059858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 3891746 |
End bp | 3892108 |
Gene Length | 363 bp |
Protein Length | 120 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640475640 |
Product | anti-anti-sigma factor |
Protein accession | YP_001160202 |
Protein GI | 145595905 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.766696 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCTGT CGATCGTAAA GTCGTTCCTA CCCCGGAGCG TCGTGGAGAT CTCGCCGCGT GGTGAGATCG ATGTCGACAC CGCGTACGAG GTACGTGAGG CGGTCGCGGA GATCCTGGCC AAAGGCCGTC CTCGTCGCAT CGAGTTGAAC ATGCGGCTGG TGACCTTCAT CGACTCTGTC GGGATCAGCG CGATGGTTGC CGGCTTCCAG ACCGCAGAGG TAAGTGGTGT GAAGCTGGTG GTGACCGAGC CGAGCCGATT CGTGCACCGG CAGCTCTGGG TTGCTGGTCT ACTCGGACTC TTCGGCGCCC CCGAGCCCTA CTTCGCGGGG GCCGCGGCCC CGGAGGTCCT GCCGGGGGCC TGA
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Protein sequence | MSLSIVKSFL PRSVVEISPR GEIDVDTAYE VREAVAEILA KGRPRRIELN MRLVTFIDSV GISAMVAGFQ TAEVSGVKLV VTEPSRFVHR QLWVAGLLGL FGAPEPYFAG AAAPEVLPGA
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