Gene Strop_3390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3390 
Symbol 
ID5059857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3890599 
End bp3891669 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content69% 
IMG OID640475639 
Producthypothetical protein 
Protein accessionYP_001160201 
Protein GI145595904 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG4942] Membrane-bound metallopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.389067 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGCAG TGGCACCCGT ACGACACCGC GCCGCCCGGG TGGCGGCCCT GATCATCGTG 
GCGCTCACCC TCGGTGCCGG CCTCGCCCCG GTAGACCCCG CGGTAGCCGC TCCCCCCGCC
CGCCAGATCG CGGTGACCGA CGACCCGGAG GGCGGCACCC CTGCCCTTCG CGCCGAGCTC
GAGGCAGCCA GCAAGGGCTA CCTGGACGCG AAACGAGCCC TGACCGAGTC GGTGCAGCGG
CAGGAGCAGC TCACCGCCCA ACTGGAAACC ACCAAGGCCC AGCGCGTCGA ACGCACCGAG
CGGGTTGAGG AGATCGCCGA TCTGGCGTAT CGCACCGGTC CGCTGCGCAC GGCGTCGGTG
CTACTCGACA ACGCGTCACC GGCGAACTTC CTGGACCGCG TCGCCGCGCT GGAGGCGGTA
GTCGCCAACG AGGACCAGGC CCTGCACGAA TTGCAGGAGA CCCAGGAACA GATCGCCCAG
GACACCCGCG CGGTCGACGC CGAGATCATC GAACAGCGCA AGCAAGAGAC CCTGATGGCC
AAGCGCAAGC AACAGGCGGA GAAGGCACTG GCGGTCGCCA ATGAGCAGGC CCGCGCCGAA
GCCGCCCCCA CCAACACCAG CACCACCCAG AACTCGGCCT CGGCAGCGCC GGCCCCACGC
AACCCGGACG GCTCCTGGCC GGCCGAGACG TGCAGCGTCA ATGATCCCAC CCCGGCGGAT
GGGTGCATTA CCCCGCGAAC CCTGCATGCG CTGAACGAGG CCAAGGCGGC CGGTTTCACC
CGCTACGTGT CCTGCTTCCG CTCCGGCGGC TCCGGCGAGC ACCCAAAGGG CCGGGCCTGC
GACTTCGCTG CTCAGCAGGA CGGCTTCGGC GGAGATGCCA CCGGCGGCGA CCGGACGTAC
GGCAACAACC TGGCGGCGTT CCTGGTGGAC AACGCCGACC AACTCGCGGT GCTCTACGTG
ATCTGGTATC GGCAGATCTG GTTGCCCAGC AGTGGGTGGA CGTCGTACAG CGGGGCCGCC
GGCGACCCAT CCAGCGACCA CACCAACCAC GTGCACCTGT CGGTCTACTA A
 
Protein sequence
MPAVAPVRHR AARVAALIIV ALTLGAGLAP VDPAVAAPPA RQIAVTDDPE GGTPALRAEL 
EAASKGYLDA KRALTESVQR QEQLTAQLET TKAQRVERTE RVEEIADLAY RTGPLRTASV
LLDNASPANF LDRVAALEAV VANEDQALHE LQETQEQIAQ DTRAVDAEII EQRKQETLMA
KRKQQAEKAL AVANEQARAE AAPTNTSTTQ NSASAAPAPR NPDGSWPAET CSVNDPTPAD
GCITPRTLHA LNEAKAAGFT RYVSCFRSGG SGEHPKGRAC DFAAQQDGFG GDATGGDRTY
GNNLAAFLVD NADQLAVLYV IWYRQIWLPS SGWTSYSGAA GDPSSDHTNH VHLSVY