Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3390 |
Symbol | |
ID | 5059857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 3890599 |
End bp | 3891669 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640475639 |
Product | hypothetical protein |
Protein accession | YP_001160201 |
Protein GI | 145595904 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG4942] Membrane-bound metallopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.389067 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGCAG TGGCACCCGT ACGACACCGC GCCGCCCGGG TGGCGGCCCT GATCATCGTG GCGCTCACCC TCGGTGCCGG CCTCGCCCCG GTAGACCCCG CGGTAGCCGC TCCCCCCGCC CGCCAGATCG CGGTGACCGA CGACCCGGAG GGCGGCACCC CTGCCCTTCG CGCCGAGCTC GAGGCAGCCA GCAAGGGCTA CCTGGACGCG AAACGAGCCC TGACCGAGTC GGTGCAGCGG CAGGAGCAGC TCACCGCCCA ACTGGAAACC ACCAAGGCCC AGCGCGTCGA ACGCACCGAG CGGGTTGAGG AGATCGCCGA TCTGGCGTAT CGCACCGGTC CGCTGCGCAC GGCGTCGGTG CTACTCGACA ACGCGTCACC GGCGAACTTC CTGGACCGCG TCGCCGCGCT GGAGGCGGTA GTCGCCAACG AGGACCAGGC CCTGCACGAA TTGCAGGAGA CCCAGGAACA GATCGCCCAG GACACCCGCG CGGTCGACGC CGAGATCATC GAACAGCGCA AGCAAGAGAC CCTGATGGCC AAGCGCAAGC AACAGGCGGA GAAGGCACTG GCGGTCGCCA ATGAGCAGGC CCGCGCCGAA GCCGCCCCCA CCAACACCAG CACCACCCAG AACTCGGCCT CGGCAGCGCC GGCCCCACGC AACCCGGACG GCTCCTGGCC GGCCGAGACG TGCAGCGTCA ATGATCCCAC CCCGGCGGAT GGGTGCATTA CCCCGCGAAC CCTGCATGCG CTGAACGAGG CCAAGGCGGC CGGTTTCACC CGCTACGTGT CCTGCTTCCG CTCCGGCGGC TCCGGCGAGC ACCCAAAGGG CCGGGCCTGC GACTTCGCTG CTCAGCAGGA CGGCTTCGGC GGAGATGCCA CCGGCGGCGA CCGGACGTAC GGCAACAACC TGGCGGCGTT CCTGGTGGAC AACGCCGACC AACTCGCGGT GCTCTACGTG ATCTGGTATC GGCAGATCTG GTTGCCCAGC AGTGGGTGGA CGTCGTACAG CGGGGCCGCC GGCGACCCAT CCAGCGACCA CACCAACCAC GTGCACCTGT CGGTCTACTA A
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Protein sequence | MPAVAPVRHR AARVAALIIV ALTLGAGLAP VDPAVAAPPA RQIAVTDDPE GGTPALRAEL EAASKGYLDA KRALTESVQR QEQLTAQLET TKAQRVERTE RVEEIADLAY RTGPLRTASV LLDNASPANF LDRVAALEAV VANEDQALHE LQETQEQIAQ DTRAVDAEII EQRKQETLMA KRKQQAEKAL AVANEQARAE AAPTNTSTTQ NSASAAPAPR NPDGSWPAET CSVNDPTPAD GCITPRTLHA LNEAKAAGFT RYVSCFRSGG SGEHPKGRAC DFAAQQDGFG GDATGGDRTY GNNLAAFLVD NADQLAVLYV IWYRQIWLPS SGWTSYSGAA GDPSSDHTNH VHLSVY
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