Gene Strop_3387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3387 
Symbol 
ID5059854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3886072 
End bp3886992 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content72% 
IMG OID640475636 
Productalpha/beta hydrolase fold 
Protein accessionYP_001160198 
Protein GI145595901 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.554659 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGACG TTCGTGAACT CCGCCTCACT GACGACGTTC GCCTGCACGT CGAAACCGAC 
GGTCCAGTCG ATGCCGAGGT AACCGCCGTG CTGCTGCACG GCTGGACTCT GGACGGGAAC
ATCTGGCACC GGCAACTCGC CACGTTGCGG GACCGCTTCG GCGCGAAGGT ACGGGTGGTG
ACCTACGACG CGCGCGGGCA CGGGCGATCC AGCTGCATGA CGCTGCCCAC CGCCACCCTG
GCCCAACTCG GCGACGACCT CGCGGCGGTG CTGGACACGG TTGTCCCCAC CGGGCGGGTG
GTACTGATAG GCCACTCCAT GGGCGGAATG ACGATCATGG AGTACGCCCA CCGCCACCCC
ACGCACTTCG CCGCCCGCGT CGCCGGTCTG GTCTTCGTCT CCACCACCGC CGAGGGGCAC
ACGCACACCG TCTACGGCCT GTCGCCCCGG GTCGCCCGGC TGATCCGGCG CGCGGAGAGC
ACCGGCGCCG GCGTCCTGGC CCGCTGCGGA TCCCGGCGAC CGCCCCGGCC GTTACTCCGC
GCCCTCCGAC CAAGCATCCG CTGGATACTC TTCGGCGACC GGTACAACCC GGCCGATCTC
CGCCTGGTCA CCCGTGCCGT GGCGCACGCG TCACTCCGCT CGATCGGCGG GTTCCGCGCC
TCGATCGGAG CCCAGCACCG GCTGGCGACC CTGGCGGGCT TGACCCACCT ACCGAGCGTC
ACACTGGTCG GCGACCGGGA CCGACTGACC CCACTGCCGT GCACGGAATC CATCGCGGCC
GCGCTGCCGA CCACCCGGCG GACTGTGTGC CCAGGCGCGG GTCACCTGCT GATGCTGGAG
CGCCCCGGCG CCGTGAACAC CGCCCTGGCC GGAGTGTTGG GCCGGGTCCT CGACAGCCCC
GCCGCGCCGG TCGCCCGGTA G
 
Protein sequence
MPDVRELRLT DDVRLHVETD GPVDAEVTAV LLHGWTLDGN IWHRQLATLR DRFGAKVRVV 
TYDARGHGRS SCMTLPTATL AQLGDDLAAV LDTVVPTGRV VLIGHSMGGM TIMEYAHRHP
THFAARVAGL VFVSTTAEGH THTVYGLSPR VARLIRRAES TGAGVLARCG SRRPPRPLLR
ALRPSIRWIL FGDRYNPADL RLVTRAVAHA SLRSIGGFRA SIGAQHRLAT LAGLTHLPSV
TLVGDRDRLT PLPCTESIAA ALPTTRRTVC PGAGHLLMLE RPGAVNTALA GVLGRVLDSP
AAPVAR