Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3387 |
Symbol | |
ID | 5059854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 3886072 |
End bp | 3886992 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640475636 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001160198 |
Protein GI | 145595901 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.554659 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGACG TTCGTGAACT CCGCCTCACT GACGACGTTC GCCTGCACGT CGAAACCGAC GGTCCAGTCG ATGCCGAGGT AACCGCCGTG CTGCTGCACG GCTGGACTCT GGACGGGAAC ATCTGGCACC GGCAACTCGC CACGTTGCGG GACCGCTTCG GCGCGAAGGT ACGGGTGGTG ACCTACGACG CGCGCGGGCA CGGGCGATCC AGCTGCATGA CGCTGCCCAC CGCCACCCTG GCCCAACTCG GCGACGACCT CGCGGCGGTG CTGGACACGG TTGTCCCCAC CGGGCGGGTG GTACTGATAG GCCACTCCAT GGGCGGAATG ACGATCATGG AGTACGCCCA CCGCCACCCC ACGCACTTCG CCGCCCGCGT CGCCGGTCTG GTCTTCGTCT CCACCACCGC CGAGGGGCAC ACGCACACCG TCTACGGCCT GTCGCCCCGG GTCGCCCGGC TGATCCGGCG CGCGGAGAGC ACCGGCGCCG GCGTCCTGGC CCGCTGCGGA TCCCGGCGAC CGCCCCGGCC GTTACTCCGC GCCCTCCGAC CAAGCATCCG CTGGATACTC TTCGGCGACC GGTACAACCC GGCCGATCTC CGCCTGGTCA CCCGTGCCGT GGCGCACGCG TCACTCCGCT CGATCGGCGG GTTCCGCGCC TCGATCGGAG CCCAGCACCG GCTGGCGACC CTGGCGGGCT TGACCCACCT ACCGAGCGTC ACACTGGTCG GCGACCGGGA CCGACTGACC CCACTGCCGT GCACGGAATC CATCGCGGCC GCGCTGCCGA CCACCCGGCG GACTGTGTGC CCAGGCGCGG GTCACCTGCT GATGCTGGAG CGCCCCGGCG CCGTGAACAC CGCCCTGGCC GGAGTGTTGG GCCGGGTCCT CGACAGCCCC GCCGCGCCGG TCGCCCGGTA G
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Protein sequence | MPDVRELRLT DDVRLHVETD GPVDAEVTAV LLHGWTLDGN IWHRQLATLR DRFGAKVRVV TYDARGHGRS SCMTLPTATL AQLGDDLAAV LDTVVPTGRV VLIGHSMGGM TIMEYAHRHP THFAARVAGL VFVSTTAEGH THTVYGLSPR VARLIRRAES TGAGVLARCG SRRPPRPLLR ALRPSIRWIL FGDRYNPADL RLVTRAVAHA SLRSIGGFRA SIGAQHRLAT LAGLTHLPSV TLVGDRDRLT PLPCTESIAA ALPTTRRTVC PGAGHLLMLE RPGAVNTALA GVLGRVLDSP AAPVAR
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