Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_3377 |
Symbol | |
ID | 5059844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 3875360 |
End bp | 3876781 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640475626 |
Product | hypothetical protein |
Protein accession | YP_001160188 |
Protein GI | 145595891 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism [T] Signal transduction mechanisms |
COG ID | [COG2508] Regulator of polyketide synthase expression |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.541372 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGCACG CGTACCAGGT CACATTTCGA ATCGACTCGA ATCACCGACC TCAGGCGAAC CGCCCGGCTG ACACGCGCCT CCGGAGGCGG GGCGCGACGG ATGCCCGAGC CGCGGGGAAC ACCCACCCGT CGACCGCCGG AAGCCACGCT CACCCGCCAC AACACCGGCA GGGGGCGACG TGTCAGGCTA GGGCGGTGAA CGAGCCGGGA ACCGAGCTGG CGGCCACGCT GCGCCGGATC GAGCGGGCGG CGGGAGCGCT CGCCACCGCC AGCGTGGCGC GGATGGACGA GACACTGCCC TGGTTCCGCG AGCTCCCGGC CGACCAACGC TCCTGGGTCA TGTTGGTGGC GCAGGCTGGC GCCCGCTCAC TGGTGCAGTG GCTGCGCGCC GGCGGCGGCA CCGCGGACAG CACCCAGGAG GTCTCCGACG AGGTCTTCGC GACCGCGCCG CAAGCCCTGG CCCGCTCCAT CAGCCTCCAG CAGACAGTGG CCCTGATCAA GGTGACCATC GACGTGGTGG AGGAACGGGT CCCGACCCTC GCCGCTCCCG GCGAGGAGCA GCAGTTACGA GATGTGGTGC TGCGCTACTC CCGGGAGATC GCGTTCGCCG CCGCCCGGGT GTACGCGCGG GCCGCCGAGT CCCGTGGTTC CTGGGACGCC CGACTCCAGG CCCTCCTGGT CGACGCGCTG CTGCGTGGCG ACTCACCAGA CGTGTTGGCC AGCCGGGCGG CGGCGCTGGG TTGGGCGGAC GCGCCCCCGG TGGCGGTGGC GGTAGGCCGC TCCCCGGGCG GGGAGGTCTC CGCCGTGCTG CACACCGTCT ACCGCTTGGC CCGGCGAATC GGCGCCGAGG TGATCGGCGG CGTGCACGGC GACCGCCTGG TCATCGTGCT CGGTGGCGTG GCCGATCCGG TGGCCGCCAC CGGCAAGCTG CTCGACGCCT TTGGTACCGG CCCGGTCGTG GTGGGCCCGG CCGTGCCGAG CCTGGACGAG GCCACCGACT CCGCCCGGGC CGCGCTCGCC GGTTTCCGGG CCGCCCCCGC CTGGCCGGCC GCGCCCCGAC CGGTGCCCGC GGCCGACCTG CTGCCGGAGC GGGCGCTTGC CGGGGATGCC GAGGCCCGCC GCCGGCTGCG GCACGACGTG TACGCCACGC TGGCCCGCTC CGGCGGGGAG CTACTGGAGA CCCTGGATGC CTTCTTCACC GCCAGCGGCA CCCTGGAGAG CACGGCCCGG GCGCTGTTCG TACACCCGAA CACGGTGCGG TACCGACTGC GACGGGTGGC GGAGGTGACC GGGCTCTCTC CCCTCGCGGC ACGGGACGCG TACGCGCTCC AGGTGGCGCT CACCGTCGGC CGACTCGACC CGGTAGTCGC CCTAACCCCG AACCGGACAA CAAACTCGAT AAATCCCAAA ACAGGGCAAT AG
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Protein sequence | MPHAYQVTFR IDSNHRPQAN RPADTRLRRR GATDARAAGN THPSTAGSHA HPPQHRQGAT CQARAVNEPG TELAATLRRI ERAAGALATA SVARMDETLP WFRELPADQR SWVMLVAQAG ARSLVQWLRA GGGTADSTQE VSDEVFATAP QALARSISLQ QTVALIKVTI DVVEERVPTL AAPGEEQQLR DVVLRYSREI AFAAARVYAR AAESRGSWDA RLQALLVDAL LRGDSPDVLA SRAAALGWAD APPVAVAVGR SPGGEVSAVL HTVYRLARRI GAEVIGGVHG DRLVIVLGGV ADPVAATGKL LDAFGTGPVV VGPAVPSLDE ATDSARAALA GFRAAPAWPA APRPVPAADL LPERALAGDA EARRRLRHDV YATLARSGGE LLETLDAFFT ASGTLESTAR ALFVHPNTVR YRLRRVAEVT GLSPLAARDA YALQVALTVG RLDPVVALTP NRTTNSINPK TGQ
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