Gene Strop_3375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3375 
SymbolgltX 
ID5059842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3872610 
End bp3874007 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content69% 
IMG OID640475624 
Productglutamyl-tRNA synthetase 
Protein accessionYP_001160186 
Protein GI145595889 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID[TIGR00464] glutamyl-tRNA synthetase, bacterial family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCTTCG CCCCCTCCCC GACCGGAATG TTCCACGTCG GCGGTGCCCG CTCTGCCCTG 
CAGAACTGGA TCTTCGCCAA GCAGCAGGGC GGGGTGTTCG TACTCCGGGT CGAGGACACG
GACGCGGCCC GCAACAAGCC CGAGTGGACC GAGGGAATCC TGGCGGCGCT GGAGTGGATC
GGCATCGCGC GCGGTAGCTA CGAAGGGCCC TACTTCCAGT CCTCGTACGC GACCGAGCAC
CGCGCCGCCG CCAGCCGGCT ACACGAGGGC GGGCGCGCGT ACTACTGCGA CTGCACCCGT
GAGGTGGTGC AGGCCCGTAC CGGCTCGCCA CACACCGGCT ACGACGGCTT CTGCCGGGAC
CGGAACCTGG GGCCGGGTGC CGGCCGCGCC CTACGCTTCC GGACCCCGGA CGAGGGTGCG
ACCGTGGTGG TCGACCTGAT CCGCGGTGAG CCCACCTTCG ACAATCGGCT GATCGAGGAC
TTCGTGATCG CCCGAAGCGA CGGCTCACCG GTCTTCCTGC TCGCCAACGT GGTTGACGAC
ATGACGATGG GGATCACCCA CGTCATCCGG GCCGAGGAGC ACCTACCCAA CACCCCGAAG
CAACAGCTGC TCTGGGACGC ACTCGGCGTC AAGCCACCGG TCTGGGCGCA CGTCCCGGTC
GTCGTCAACG AGAAGCGGCA GAAGCTGTCC AAGCGCCGCG ACAAGGTCGC CCTGGAGGCG
TACCGCGACG AGGGCTATCT GGCCGACGCG ATGTGCAACT ACCTGATGCT GCTCGGTTGG
GCCCCGTCCG GCGACCGGGA GATCGTGCCC TGGCCGGTCA TCGAGGAGGA GTTCCGACTG
GAGGAGGTGA ACCCCTCCTC GGCCTTCTTC GACGAGAAGA AGCTACGCGC GTTCAACGGT
GAGTACATCC GAGCGCTGCC GATCGCCGAG TTCATCGCGG GATGCCAGCC GTGGTTGACC
GGTACCGCGA CGATCGCACC TCCGCCGTGG CAGCCGGACG AGTTCGACGC CGAGGCGTTC
GCGGCGGTGG CACCGCTGGC ACAGACCCGC ATCGCCGTCC TCAGCGAGAT CGTGCCCAAC
GTGGACTTCC TCTTCCTCGA CTCGCCGCTG ATCGACGAGG GAGCGTGGGC CAAGGCGATG
AAGGAGGGCG CCGGCGACCT GCTCGACGCG GTGATCGCCG CCTTCACCGC GCTGCCTTCG
TGGGACGCGG ACTCAACCAA GTCGACACTG GAGGCAGTCG GTGCGGAGCA CGGCCTGAAG
CTGGGCAAGG CTCAGGCACC CGTCCGGGTA GCGGTGACCG GCCGCCGGGT CGGTCTCCCC
CTCTTCGAGT CCCTCGAGGT CCTGGGCCGC GAGCGCACCC TGACCCGCCT ACGGGCTGCC
CGCCTCCGTC TCCCCTGA
 
Protein sequence
MRFAPSPTGM FHVGGARSAL QNWIFAKQQG GVFVLRVEDT DAARNKPEWT EGILAALEWI 
GIARGSYEGP YFQSSYATEH RAAASRLHEG GRAYYCDCTR EVVQARTGSP HTGYDGFCRD
RNLGPGAGRA LRFRTPDEGA TVVVDLIRGE PTFDNRLIED FVIARSDGSP VFLLANVVDD
MTMGITHVIR AEEHLPNTPK QQLLWDALGV KPPVWAHVPV VVNEKRQKLS KRRDKVALEA
YRDEGYLADA MCNYLMLLGW APSGDREIVP WPVIEEEFRL EEVNPSSAFF DEKKLRAFNG
EYIRALPIAE FIAGCQPWLT GTATIAPPPW QPDEFDAEAF AAVAPLAQTR IAVLSEIVPN
VDFLFLDSPL IDEGAWAKAM KEGAGDLLDA VIAAFTALPS WDADSTKSTL EAVGAEHGLK
LGKAQAPVRV AVTGRRVGLP LFESLEVLGR ERTLTRLRAA RLRLP