| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3367 |
|---|
| Symbol | |
|---|
| ID | 5059833 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 3863395 |
|---|
| End bp | 3864114 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640475615 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001160178 |
|---|
| Protein GI | 145595881 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3548] Predicted integral membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.322545 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGCAGG CGGGTGGAGG GCCGAGACAC CGGTTTCGGC GAGACAGCGA GATGTCCCGG
GACACAGTCC GGGTGGAGGC CTTCAGCGAT GCCGTGATCG CTGTCGCCCT GACGCTGATG
GCGGTGGAGC TGCTCCAGTT CAACCCGAGT GGAGCTGCCG ACACGGACCT GGTGTCGAGG
CTCCAGCAGG AGTGGCGGGC TTTCCTCGCC TACATCATCA CCTTCGCCAT CGTCGGCCAG
ATCTGGCTGA CCCACCACAA CAGTTGGCGA TACGTGGTCC GGGTCGACCA GATGCTGTTG
GTGCTGAACC TGATAATGCT GATGTTCGTG GCAGCCATCC CGTTCACGGC CAACCAGCTG
TCGGACCATC TTCGGGGCAG CGATGTGGAC CAGCAGTTGT CGGCCGCGAT CTACGTCGGT
GCAGTCCTCG GCGAAGCGCT GTTTTTCAAT CTGGGCTGGT GGTGGGCGCG CTCGCACGGG
CTACTCAACC CGGATCTCGA TCCCCGACTG GCGGCGTCGG TCTCCCGCCG GTACCTCGTC
CGCCCGCTGC TCTACCTGCT CGCCTTCGCG ATCGTCTTTG TCAATCCGAT CCTCAGCCTG
CTGGCCTACC TGTTGCTGGT GGCGATCTAT CTCGTCCGCG GTCCGGGCGA CCTCCCGCCC
GGTGGATACG AGAAATCCGA ACGCGGTGAG CCTTCGGGGG ATCATGGCCC GGAGAACTGA
|
|---|
| Protein sequence | MAQAGGGPRH RFRRDSEMSR DTVRVEAFSD AVIAVALTLM AVELLQFNPS GAADTDLVSR
LQQEWRAFLA YIITFAIVGQ IWLTHHNSWR YVVRVDQMLL VLNLIMLMFV AAIPFTANQL
SDHLRGSDVD QQLSAAIYVG AVLGEALFFN LGWWWARSHG LLNPDLDPRL AASVSRRYLV
RPLLYLLAFA IVFVNPILSL LAYLLLVAIY LVRGPGDLPP GGYEKSERGE PSGDHGPEN
|
|---|
| |