Gene Strop_3348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3348 
Symbol 
ID5059813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3842822 
End bp3843406 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content68% 
IMG OID640475596 
Producthypothetical protein 
Protein accessionYP_001160160 
Protein GI145595863 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.372059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACGA TTCTGCGTCG TAGCGTCCTG GGTATCGCTG GTCTGGCCCT GTCCACCGGT 
GTCGTCGCCG GTCCCCTGGC CACCTACACC GACAGCACCC CGGCCCCGGC TTCGGCCGCG
GCGGTGCAGG TCGCGAAGCC GGACCTGGAC ACCCTGATCC CGCACGGCAC CCAGGGCGAG
CAGTCACGGA TCAGCCTGGG TGACGAGCAG GTGTCGAACG TCAAGGCCAT CATCGAGGCC
ACGAAGGCCG CCGGGATGGA CGAGCGGGCC GCCGTCGTGG CGATCGCGAC CAGTTTGCAG
GAGTCGAAGC TGGAGAACCT GGGTCACCTG GGTGACCGCA ACGACCACGA CTCGCAGGGC
CTGTTCCAGC AGCGCCCCTC CTCCGGCTGG GGCACGGTCG AGCAGATCAC CGACCCCGCC
TACTCCACCA CCGCGTTCCT GGACGGTCTG AAGCAGGTTG ACGGTTGGCA GGAGATGCCG
TTGACCGAGG CCGCCCAGAC GGTACAGGTG TCGGCGTACC CGTTCCACTA CGCCCAGTGG
GAGACCCAGG CCGCTGACCT CGTGGCCGAA CACTGGACCA GCTGA
 
Protein sequence
MNTILRRSVL GIAGLALSTG VVAGPLATYT DSTPAPASAA AVQVAKPDLD TLIPHGTQGE 
QSRISLGDEQ VSNVKAIIEA TKAAGMDERA AVVAIATSLQ ESKLENLGHL GDRNDHDSQG
LFQQRPSSGW GTVEQITDPA YSTTAFLDGL KQVDGWQEMP LTEAAQTVQV SAYPFHYAQW
ETQAADLVAE HWTS