| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3328 |
|---|
| Symbol | |
|---|
| ID | 5059793 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 3819328 |
|---|
| End bp | 3820323 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640475576 |
|---|
| Product | lipoyl synthase |
|---|
| Protein accession | YP_001160140 |
|---|
| Protein GI | 145595843 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0320] Lipoate synthase |
|---|
| TIGRFAM ID | [TIGR00510] lipoate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0213262 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGATCG AGCACTCCGC GCCGACGACC ACTCAGGCAG CGCGTACCGC GACGCCCGCT
CCCGAGGGGC GGCGTCTCCT GCGGATCGAG GCACGCAACG CTGAGACGCC GATCGAGCGG
AAGCCACCGT GGATCAAGGT CAAGGCCAGG ATGGGCCCGG AGTACACCCA GCTACGCGGG
CTCGTCACGC GGGAGGGGTT GCACACCGTC TGCCAGGAAG CCGGCTGCCC GAACATCTAC
GAATGTTGGG AGGACCGGGA GGCCACCTTC CTCATCGGCG GCGACCAGTG CACCCGCCGC
TGCGACTTCT GCCAGATCGA CACCGGCAAG CCGGCCGAGT TCGACGCCGA CGAGCCCCGC
CGCGTCGGCG AGTCGGTGGT CTCGATGGGG CTGCGCTACG CGACCATCAC CGGAGTCGCC
CGCGACGACC TGCCCGACGG CGGCGCCTGG CTCTACGCGG AGACCGTCCG GCAGATTCAC
GCCCTCCGGC CGGGCTGCGG TGTCGAGCTG TTGATCCCCG ACTTCAACGC CGTCCCCGAG
CAGCTCACCG AGGTCTTCGG AGCGCGGCCG GAGGTACTTG GACACAACGT CGAGACCGTG
CCGCGGATCT TCAAGCGGAT CCGGCCGGCG TTCCGCTACG AGCGGTCCCT GGACGTGATC
CGGCAGGCCC GCGCCGCCGG CCTGGTCACC AAGAGCAACC TGATCCTCGG CATGGGCGAG
GAGCGTGCCG AGATCTCCCA GGCCCTCCGT GACCTGCACG AGGCGGGCTG CGAGCTGATC
ACCATCACGC AGTATCTGCG CCCCTCCCCC CGCCATCACC CCGTCGAACG CTGGGTCAAG
CCGGAGGAGT TCGTCGAGCT CCGGGAGGAG GCCGAGGAGA TTGGCTACGC CGGCGTGATG
AGCGGGCCGC TGGTCCGCTC GTCGTACCGC GCCGGCCGTC TCTACCAGCA GGCCCGCGCG
GCTCGCGGGG ACACCACGGT CGACATCCTC AGCTGA
|
|---|
| Protein sequence | MTIEHSAPTT TQAARTATPA PEGRRLLRIE ARNAETPIER KPPWIKVKAR MGPEYTQLRG
LVTREGLHTV CQEAGCPNIY ECWEDREATF LIGGDQCTRR CDFCQIDTGK PAEFDADEPR
RVGESVVSMG LRYATITGVA RDDLPDGGAW LYAETVRQIH ALRPGCGVEL LIPDFNAVPE
QLTEVFGARP EVLGHNVETV PRIFKRIRPA FRYERSLDVI RQARAAGLVT KSNLILGMGE
ERAEISQALR DLHEAGCELI TITQYLRPSP RHHPVERWVK PEEFVELREE AEEIGYAGVM
SGPLVRSSYR AGRLYQQARA ARGDTTVDIL S
|
|---|
| |