Gene Strop_3314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3314 
Symbol 
ID5059779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3801672 
End bp3802445 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content75% 
IMG OID640475562 
Productcobalamin-5-phosphate synthase CobS 
Protein accessionYP_001160126 
Protein GI145595829 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0368] Cobalamin-5-phosphate synthase 
TIGRFAM ID[TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.282641 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.33796 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGGCTG AACCGCGGCT CGCCGCCGGG GCCCGGCTGG CGCTGACCAC TTTCACCACG 
CTGCCGGTAC GGGCTGGCCG GATCGACCGA GCCGTGGCCG GCACCGCGAT GGCCCTGGCC
CCGGCCGTCG GCGCGCTGCT CGGCGCCCTC CTCGCTGGGG TACTGCTGCT CACCGGCGGC
TTCGCGCCGC CGCTGGTAGC AGCCGCCGTC ACGGTCGGCG CCGGTGCACT GCTGACCCGA
GGGCTGCACC TCGACGGGCT CGCCGACACC GTGGACGCGC TCGGCTCATA CCGACGCGGG
CCAGCCGCGC TAGAGATCAT GAAGAAGCCG GATGTCGGCC CGTTCGGGGT AGCCGCGCTG
GTGGTCATCC TCCTGTTGCA GGCGGCGGTA CTCGCGGAGC TGGCCGAATG GTCGACGTCG
ACCATGCTGA CGGCGGTGGT GACCGCCACC GCCGCCGGCC GGCTCGGGGT CACGGTGGCC
TGCTGGCGCG GGCTGCCGGC GGCCCGACCG GACGGACTGG GAGCCCTGGT CGCCGGAACC
GTCGGGCCGG GTACCCTCGC CGCCGGTACC GCCGCGGTGG CGCTGCTGGC GCTCGCCGCC
GTGCCGGACC GTCCGTGGCA GGGACCACTC GCCGTCGCCG TCGCCCTCGC CGCCGCGGTC
GGGCTGCTCC GGCACGTGGT ACGCCGCCTC GGTGGGATCA CCGGCGACGT GCTCGGTGCC
ACCGTCGAGG TGGTCACCAC CGTTGTCTAC CTGGGACTGG TCTTGTCCGG CTGA
 
Protein sequence
MPAEPRLAAG ARLALTTFTT LPVRAGRIDR AVAGTAMALA PAVGALLGAL LAGVLLLTGG 
FAPPLVAAAV TVGAGALLTR GLHLDGLADT VDALGSYRRG PAALEIMKKP DVGPFGVAAL
VVILLLQAAV LAELAEWSTS TMLTAVVTAT AAGRLGVTVA CWRGLPAARP DGLGALVAGT
VGPGTLAAGT AAVALLALAA VPDRPWQGPL AVAVALAAAV GLLRHVVRRL GGITGDVLGA
TVEVVTTVVY LGLVLSG