| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3251 |
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| Symbol | |
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| ID | 5059716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 3726911 |
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| End bp | 3727993 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640475499 |
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| Product | polyprenyl synthetase |
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| Protein accession | YP_001160063 |
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| Protein GI | 145595766 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.698392 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.34714 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCTACG CTGCTCCTGT CTCCCCGGTG GATCGTGCCG GGCTTCGGCA ACGCGTCGAC
AAGGCACTGG CCGACTTCCT GGTGACCCGA CGCGCCTGGA TGACCGACGT TGACGCCTCC
CTCGCCCCGT TGGCCGACGC GGTCGAGGCA TTCGTCCTCG GCGGCGGCAA GCGGCTACGG
CCCGCCTTCG CCTACTGGGG CTACCGGGGC GCCGGTGGGA TCGACACCGA ACAGGTGGCG
ACCGCCCTGG CCGCGTTGGA GTTCGTGCAG GCCAGCGCGC TGATTCACGA CGACCTGATC
GATCGTTCGG ACACCCGGCG GGGGGAGCCG GCGGTGCACC TGCGCTTCAC CGCCCGGCAC
CGGTCGGCGG GCTGGGATGG AGACGCGGCC GGATTCGGTG ACGCGGCGGC CATTCTCCTG
GGCGACCTGT GCCTCGTCTG GTCGGACGAG CTGCTGCACT CCGCCGGGCT GGACCCGCAC
ACCGTCGCCC GGGCACGGCC GATCTTCGAC CAGATGCGGA CCGAGGTCAC CGTGGGCCAG
TACCTCGACG TACTGACCCA GGCCACCGGG GACACGTCGG TCGAGCGGGC CGGGAAGGTC
GCCCGCTACA AGTCGGCGAA GTACACCGTC GAACGCCCAC TGCTACTCGG CGCCGCACTG
GCCGATGCCA CACCGGAGAT CCACGCGGCG TACTCGGCGT ACGGGCTGCC GCTGGGTGAG
GCATTCCAGC TGCGCGACGA TGTGCTCGGA ATCTTTGGTG ACCCCGCACA GACCGGCAAA
CCGGCCGGCG ACGACCTCCG CGAGGGGAAG CGGACGTACC TGGTGGCGGC GGCGTTGGAG
ACGGTCGGCA ACGCCGGTCG GGAGGTGCTG CTCGACGGTC TCGGTGACGC CGGCCTCGAC
GACGCGGGGG TGGCCCGGCT GCGGGAACTG ATCGGGACCA GCGGCGCACT CGACCGCGCC
GAGCAGCGGA TCCGGGAGCT CACCGACACC GCACTCGCCG CGCTGTCCAC CGTTGACCTC
GACACCGAGG CGCACCAGGC CCTGGCCGAC CTCGCCATCG CTGCCACCCG CCGCCCTGCC
TGA
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| Protein sequence | MTYAAPVSPV DRAGLRQRVD KALADFLVTR RAWMTDVDAS LAPLADAVEA FVLGGGKRLR
PAFAYWGYRG AGGIDTEQVA TALAALEFVQ ASALIHDDLI DRSDTRRGEP AVHLRFTARH
RSAGWDGDAA GFGDAAAILL GDLCLVWSDE LLHSAGLDPH TVARARPIFD QMRTEVTVGQ
YLDVLTQATG DTSVERAGKV ARYKSAKYTV ERPLLLGAAL ADATPEIHAA YSAYGLPLGE
AFQLRDDVLG IFGDPAQTGK PAGDDLREGK RTYLVAAALE TVGNAGREVL LDGLGDAGLD
DAGVARLREL IGTSGALDRA EQRIRELTDT ALAALSTVDL DTEAHQALAD LAIAATRRPA
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