| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3201 |
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| Symbol | |
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| ID | 5059666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3670057 |
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| End bp | 3671001 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640475449 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_001160013 |
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| Protein GI | 145595716 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.887852 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCGG CGTATGCCAC CGGTGGTGGC CAACGATCGC TGCCAGTCCC GGACGGGCTC
GACGGGCTCC GCCTCGACCA GGCCGTCGCG CGGCTCTTCG GGCTTAGCCG GACGACCGCG
GCGGCCCTGG TCGACGCGGG CGCCGCACTG GTCGATGGAA CGGTGCGGGC TAATTCCTAC
AAGATTCGGG CCGGGTCCTG GCTGGAGGTG ACACTGCCGG CGCCGGCAGC TCCGCCGGCG
GTCGTGCCGC AGGCGGTGTC CGGCCTGCGC GTCGTGTATG CCGACGACGA CATCGTGGTG
GTGGACAAGC CGGTCGGCGT GGCCGCCCAC CCGAGTCCCG GTTGGACCGG ACCGACCGTG
ATCGGTGGGC TTGCCGCGAT CGGCCACCGG ATCTCCACCA GCGGTGCCGC CGAGCGGCAG
GGCGTGGTGC ATCGGCTCGA TGTCGGCACG ACCGGGATCA TGGCGGTGGC CAAGAGCGAG
CAGGCATACA CCAGCTTGAA GCGGGCGTTC AAGTACCGCG AGGTGGAGAA GCGCTACCAC
GCCGTGGTGC AGGGGCATCT CGACCCGTTA CGCGGCACCA TCGACGCTCC GATCGATCGG
CATCCACACC ATGACTACCG CTGGGCGGTG GTCTCGGACG GTAAGCCCAG CATCACCCAC
TATGACACCC TGGAGGCGTT CCCGGCGGCC AGCCTGGTGG ACGTACGGCT GGAGACGGGC
CGTACGCACC AGATCCGAGT GCACTTCTCG ACGCTGCGCC ACCCCTGCGT GGGTGACCTT
ACCTACGGAG CCGATCCCAC CCTCGCCACG CGGCTCGGCC TGGATCGGCA GTGGCTTCAT
GCCCGGGAGT TAAGGTTCCG GCATCCCCGT ACGGGGGAGG AGGTCTGTTT CGTCAGCGAT
TACCCTGACG ATCTGGACCG CGCTCTGGGA ATCCTGCGGG ACTGA
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| Protein sequence | MTAAYATGGG QRSLPVPDGL DGLRLDQAVA RLFGLSRTTA AALVDAGAAL VDGTVRANSY
KIRAGSWLEV TLPAPAAPPA VVPQAVSGLR VVYADDDIVV VDKPVGVAAH PSPGWTGPTV
IGGLAAIGHR ISTSGAAERQ GVVHRLDVGT TGIMAVAKSE QAYTSLKRAF KYREVEKRYH
AVVQGHLDPL RGTIDAPIDR HPHHDYRWAV VSDGKPSITH YDTLEAFPAA SLVDVRLETG
RTHQIRVHFS TLRHPCVGDL TYGADPTLAT RLGLDRQWLH ARELRFRHPR TGEEVCFVSD
YPDDLDRALG ILRD
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