| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3184 |
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| Symbol | |
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| ID | 5059649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3655457 |
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| End bp | 3656914 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640475432 |
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| Product | regulatory protein GntR, HTH |
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| Protein accession | YP_001159996 |
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| Protein GI | 145595699 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.499034 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAGTC AAATACGCGG AAACCAATTG GCCCGGCTGC TCGGCCAGTG GCATGCGCTC
CCCGGTCGTC GGCGCAGCCC CGACTATGCG GCGCTGGCCG CCGCCATCCG GGGGCTGCTC
GCCGACGGGC GGCTTCCGCT GGGCGCCCGC CTGCCGGCCG AGCGGGAGCT GGCGGAGTCG
CTGCGGATCA GCCGGACCAC GGTCACCGCG GCCTATCGGG AGCTTCGCGA CAGTGGCCAC
CTCGCCAGCC GGCGAGGTGC CGGCAGCTGG ACCATGCTCC CCGGCAACCA TCGGGTGGCG
GGGAGCGGCC TCTGGACCCC GCTCGAGGAC CGCGAGATGC TTGATCTTGG AGTCGCGGCC
CTGGCCGCCC CGCCCGAGCT GCTGCCCGCT GCCCAGGCCG CCGCCGCGGA CCTACCCAGC
TACCTGGGTG GGGCGGGCTA CCACCCCACC GGTATCAGCG AACTGCGGGA GGCCATCGCC
CGCACGTACG ACGAACGGGG CCTACCCACC TCACCCGAGC AGATCATGGT CACCAATGGC
ACCCAGCACG CCCTGGACCT GGTGCTCCGC CTCACCCACA GTCCGGGCAG CAGCGTCCTG
GTGGAGGCGC CCAGCTATCC GAACGCCCTG GCCGCGCTGC ATGGCCGGCG GGCCCGCATC
AGCACCCACG GCCTCGCCCC GGATGCCCCC GGTTGGGACG CTGACCTCCT GCTCGGCGCC
CTCCGTCAGG GGCGACCCAA ACTGGCCTAC CTGATCCCCG ACTTTCAGAA CCCGACCGGC
CACCTGATGT CGGCCCAGCT GCGGGAACGG CTGGTCGCCA CCGCGCACGC CGTCGGCGCC
GACCTGGTGG TCGACGAGTC GTTCGTGGAC CTCTCCCTGG ATGGCAGGGT GATGCCCCCG
CCCACGGCCA GCTTCGATCG GCACTCCCGG GTGCTCACCG TCGGGGGGAT GAGCAAGGCG
TACTGGGGTG GGTTGCGGAT CGGCTGGATC CGCGCCTCCG CGCCACAGGT GCAGCGGCTC
GCCGCCGTCC GGGTCGGGGT GGACATGGCG AGTCCGGTGC TGGACCAGCT GGTCGCCGTC
CACCTACTGG CACAGGGTCC GGCGATCGTG GCGGCCCGGC GGGGACAGCT CACCGCCCAG
CGGGACGCGT TGCTCGGTGC CCTCGCCGAG CGCCTGCCCG AGTGGCGGGT GACCGTGCCG
CACGGTGGAG TCACCCTCTG GGCGGAGCTC GACGGCCCGA TCTCCAGCGC GCTCGCCCGA
GCTGCCGAGC AGGTGGGCGT ACGCCTTGCC CCCGGCCCTC GGTTCGGTCT GGACGGGACG
CTGGAGCGCT TCCTGCGGTT GCCGTTCACC CTGCCCGGCG CCGATTTGGT GGAGGCGGTC
GACCGGATCG CCGCCGTCCG GTACGACCTG GACCGCGTCG GCCGGCCGCA GTGGTCGGAG
CCGGCGGTCA TCGCCTGA
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| Protein sequence | MTSQIRGNQL ARLLGQWHAL PGRRRSPDYA ALAAAIRGLL ADGRLPLGAR LPAERELAES
LRISRTTVTA AYRELRDSGH LASRRGAGSW TMLPGNHRVA GSGLWTPLED REMLDLGVAA
LAAPPELLPA AQAAAADLPS YLGGAGYHPT GISELREAIA RTYDERGLPT SPEQIMVTNG
TQHALDLVLR LTHSPGSSVL VEAPSYPNAL AALHGRRARI STHGLAPDAP GWDADLLLGA
LRQGRPKLAY LIPDFQNPTG HLMSAQLRER LVATAHAVGA DLVVDESFVD LSLDGRVMPP
PTASFDRHSR VLTVGGMSKA YWGGLRIGWI RASAPQVQRL AAVRVGVDMA SPVLDQLVAV
HLLAQGPAIV AARRGQLTAQ RDALLGALAE RLPEWRVTVP HGGVTLWAEL DGPISSALAR
AAEQVGVRLA PGPRFGLDGT LERFLRLPFT LPGADLVEAV DRIAAVRYDL DRVGRPQWSE
PAVIA
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