| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3149 |
|---|
| Symbol | |
|---|
| ID | 5059613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 3614836 |
|---|
| End bp | 3615810 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640475396 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_001159961 |
|---|
| Protein GI | 145595664 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.766269 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.537762 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACTTCG ATGCCTTATT CGGCGACCTC GCTCAGCACA CTGTTGACGG CTTGTCCAAG
GGGGCGATCT ATGCCCTCGT CGCCCTGGGG TACACGCTCG TCTATGGTGT GCTCCGTCTG
ATCAACTTCG CGCACTCTGA GATCTTCATG GTGGGTACCT TCGCGATCCT CGGCACCTGG
TCGCTGCTCG GGGTGGCCGA CAACCCGCCG ATCGGGATGG CGATCGTCTA CCTGCTCATC
GGTCTGGTGG TCGGTGCGCT GGCCTCGGGT GCCACCGCAC TCACCGTCGA ACGGGTCGCC
TACCGGCGAC TACGCCGGAT GAACGCGCCG CCGCTGATCT TCCTGATCAC CGCCATCGGG
CTCTCGCTCG TCCTGGTGGA GATCTTCGCG CTGTGGATGG CAGGGTTCTT CTCGGGGCGT
GGATTCACCG AGAACCGACT CGTGATCGGG ATTCCGCCGC TGCTGAAGCA GGAGACAGTG
CTCTCGGTGG CGGGTGCCGA CATCACCAAC GTACAGATCA TCATGGTGCT CTCCGCCCTC
CTGATGCTCT ACGGGTTGGA CCAGTTCATC AACCGGACGC GGTACGGACG CGGGGTGCGG
GCCGTGGCAC AGAGCCCGGA CACCGCCGCG CTGATGGGGG TGCACCAGGA CCGAGTGATC
ATGCTGGTCT TCGTCCTGGG TGGATTGATG GCGGGCGCCG CGGCCCTGTT GTGGAACATG
CGGTACGGGA TCACCAAGTT CGACATCGGC TTCGTGGTCG GGCTGAAGGC GTTCACCGCG
GCGGTGCTCG GTGGTATCGG CAACCTCCGT GGCGCGCTGC TCGGTGGCCT GCTACTCGGG
GTCATCGAGG TGTACGCGGC GACGTTGACC CGATCCACCT GGGAGGATGT TGCCGCCTTC
GTGGTGCTCG TGGTGGTGCT GATCTTCCGC CCGACCGGCC TGCTCGGTGA GTCTCTCGGA
AAGGCGAGGG CATGA
|
|---|
| Protein sequence | MNFDALFGDL AQHTVDGLSK GAIYALVALG YTLVYGVLRL INFAHSEIFM VGTFAILGTW
SLLGVADNPP IGMAIVYLLI GLVVGALASG ATALTVERVA YRRLRRMNAP PLIFLITAIG
LSLVLVEIFA LWMAGFFSGR GFTENRLVIG IPPLLKQETV LSVAGADITN VQIIMVLSAL
LMLYGLDQFI NRTRYGRGVR AVAQSPDTAA LMGVHQDRVI MLVFVLGGLM AGAAALLWNM
RYGITKFDIG FVVGLKAFTA AVLGGIGNLR GALLGGLLLG VIEVYAATLT RSTWEDVAAF
VVLVVVLIFR PTGLLGESLG KARA
|
|---|
| |