| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3143 |
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| Symbol | |
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| ID | 5059607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3607935 |
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| End bp | 3608546 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640475390 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001159955 |
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| Protein GI | 145595658 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.828512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.93709 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCGG TAGCGACGGC CTGCTGGGGC CTGGTGTTCT GGGAGCGGCA GGGCACCTGG
TACGCGGCCG TCACCGGACC CGAGACGAAG ACCGACATCG CGCCGGTGCC GGAGGGCGCG
CGCTTCGTCG GAATCGACTT CGCCGTGGGT ACGTCGCTGC GGGTCCTACC GACGCCGGCT
CTTGTGGACG GCGGCACCCA GCTTCCCGAC ACCACCCGCC GGACGTTCCG GCTGGCTGGC
GTCCGCTGGG AGACACCCGG TCCGGACGAC GCCGAGGCCC TGGTGGACCG CCTGGTCCGC
ACGGGAGCCG TCGTCCGGGA CCCGATCGTC ACCGCGGTCC GCCGAGGCCA CCGGCCACCG
GTCTCGCAGC GTACCGTCGA ACGTCGATTT CGAGCGGCGA CCGGGCTCAC CCAGGGCGCC
GTGCGGCAGG TCGAACGGGT ACGCGAGGCC GCGGCGCTCC TGGCTGCCGC CACCCCGGTG
GCCGATGTCG TCTCTCGGCT CGACTACGTT GACGAGCCGC ACCTGGCCCG AGCGCTGCGC
CGGTACGTGG GCCGTACGGC GCGGCAACTG CGCGAGGGCG CTGGCGGCCC GATCGCCCTG
GACCTGAATT AG
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| Protein sequence | MTSVATACWG LVFWERQGTW YAAVTGPETK TDIAPVPEGA RFVGIDFAVG TSLRVLPTPA
LVDGGTQLPD TTRRTFRLAG VRWETPGPDD AEALVDRLVR TGAVVRDPIV TAVRRGHRPP
VSQRTVERRF RAATGLTQGA VRQVERVREA AALLAAATPV ADVVSRLDYV DEPHLARALR
RYVGRTARQL REGAGGPIAL DLN
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