| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3129 |
|---|
| Symbol | |
|---|
| ID | 5059593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 3589002 |
|---|
| End bp | 3591125 |
|---|
| Gene Length | 2124 bp |
|---|
| Protein Length | 707 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640475376 |
|---|
| Product | MMPL domain-containing protein |
|---|
| Protein accession | YP_001159941 |
|---|
| Protein GI | 145595644 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2409] Predicted drug exporters of the RND superfamily |
|---|
| TIGRFAM ID | [TIGR00833] Transport protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGTCT TCACCCACGT AGCCCGGGGC AGGTGGGCCG CGTGGCTCAC CGTGGTCGCC
ACGATCGTCC TCGGCGCCGC CGTCTTCGGG CTGCCAAAGC CCGACAACCC CGCTCCCGTC
TCCGCCACCG GGCTCTCCGA CCAGTGGCAG TCCACCCAGG TCGAACGGCT CCAGGAACAG
CTGCCCGCCA ACGATGTCCA ACCGGCTCTC GTCGTCGTCA GCCGCACCGA CGGCGGTACG
CTCACCACCG CCGACCGGGA GACCGTCACC GGGCAGATCA GCGAACTACG CCGGTTCGCG
GTCAATGGGC AGGTGCCACC ACCGCAGATC GCCCCGGACG GCTCGGTCGC CCTGATCGCC
GTGCCGCTGT CCATCGAGGG GCAGGAGCAG ACCGTCGAGA CCGTCGACGA GCTACGGGCC
GCCCTGGCCG GCACTCCGGC AGCCCTCACC GTCGAGGTCA CCGGGGCACC GGCCTTCACC
ACCGATCTGA CCCGGGTCTT CGAGGGCGCG GACAGCACCC TGCTGGCGGT AACCGCCGCG
GTGGTGGCGC TGCTGCTGCT GATCACCTAC CGCAGCCCGG TCCTCTGGAT GGTGCCGCTG
GCGGTCGTCG CCGCCACCGA GCAGCTCACC CTGCGTGCCG TCGAGACGAT TGTTCCGGCG
GTCGGGATCA ACCTGCAGTC GGGAGCCGTC ACCGGCATCG CCAGCGTCCT CGTCTTCGGT
GCCGCCACCA ACTACGCGCT GCTGCTGATC GCCCGCTACC GGGAGGAGCT GCGCCGCGAA
GCGGACCGCT TCGCGGCGAT GCGGACCGCG GTGCGCCGCA CCGCGGAACC CATCCTGGCC
AGCGGCTCCA CCGTCGTCCT CGGCGTTCTC ACCCTGCTGC TCTCGGAGCA GGAGAACAAC
CGGGCGCTCG CCGTGGCCTG CGCCACCGGC GTCGTGCTCG CCATGCTCTC CGCGCTCTTC
GTACTCCCGG CCGCCCTGGT GATTTTCGGC CGTGGCCTGT TCTGGCCGTT CGTCCCGCGC
CTCGGCAGCG CGGTCACCGA AGGACGCCTG TGGGGTCGGC TCGGTACCGT GGTCCTGCGC
CGCCCGGCCT CCGTCGCGGT CCTGGCGACG CTCCTGCTGG CCGGGCTGGC CCTCGGCGGC
CTCGGCATCC GGACCGGACT GTCGGAGACC GAGCAGTTCC GGGTCGAACC GGAGGCGGTC
GCCGGAGCCG AGACCCTGGC GACGGCGTTC CCCGCCGGGA CCACCCAGCC GGTCGCGGTG
CTCACCACTC CGACCGCCGT CGACGCGGTC ACCGCGGCCG CCGCAACCGT GCCCGGCGTC
GCCTCAGCCC GACCGGGTAG CACCGGCACC ACCGTCGCCC AGGTCGACGT GGTGCTGACC
GCCGAGCCCG GCACCGCCGC CTCCGACCAG ACGGTACGGG AGCTGCGCAG GGCGGTCGTC
GCGGTGCCCG ACTCCGCCCC ACCCGCGGTT GACGGCGCCG GACCCTTCGA AGGAGCCCTG
GTCGGCGGGG ACGTCGCCGC CGGCTACGAC ACCGCCGAGG CCAACACGAT GGACCTGCGA
CTGATCCTGC CGATCATCCT GCTGTTGGTC GCCGCCGTCC TGGCACTGCT GCTGCGCGGC
CTGCTAGCCC CGGTGCTGCT GGTACTCAGC GTAATCGCGT CGTTCTTCGC CAGTCTCGGG
GCGGCGTGGC TGCTCTTCGA CCACGTCCTG GACTTCCCCG CGCTGGACAG CGGCGTGCTC
CTGCTCGCGT TCGTGTTCCT CGTCGCCCTC GGGGTGGACT ACAACATCTT CCTGGTCACC
CGGGCCCGGG AGGACGCCCG CCACACCGGG ACCCGCGACG GGATGCTCTC GGCCCTCCGG
GTTACCGGCG GCGTCATCAC CAGCGCTGGA GTGCTACTGG CCGCGGTCTT CGCCGTCCTC
GGCGTGCTCC CGCTGATCCT GCTCACCCAG ATCGGAGTCA TCGTCTGCAT CGGTGTCCTG
CTCGACACCC TGCTCGTCCG GACGGTGCTG GTCCCCGCCC TCGTGTTCCT GCTCGGCGAC
CGGTTCTGGT GGCCCGGCCG CCCGCCGGCC GTGGCCCACG GAGGAGCCTC GGCCATACCG
GCGCCGGTCC CCGCCCACGA CTGA
|
|---|
| Protein sequence | MSVFTHVARG RWAAWLTVVA TIVLGAAVFG LPKPDNPAPV SATGLSDQWQ STQVERLQEQ
LPANDVQPAL VVVSRTDGGT LTTADRETVT GQISELRRFA VNGQVPPPQI APDGSVALIA
VPLSIEGQEQ TVETVDELRA ALAGTPAALT VEVTGAPAFT TDLTRVFEGA DSTLLAVTAA
VVALLLLITY RSPVLWMVPL AVVAATEQLT LRAVETIVPA VGINLQSGAV TGIASVLVFG
AATNYALLLI ARYREELRRE ADRFAAMRTA VRRTAEPILA SGSTVVLGVL TLLLSEQENN
RALAVACATG VVLAMLSALF VLPAALVIFG RGLFWPFVPR LGSAVTEGRL WGRLGTVVLR
RPASVAVLAT LLLAGLALGG LGIRTGLSET EQFRVEPEAV AGAETLATAF PAGTTQPVAV
LTTPTAVDAV TAAAATVPGV ASARPGSTGT TVAQVDVVLT AEPGTAASDQ TVRELRRAVV
AVPDSAPPAV DGAGPFEGAL VGGDVAAGYD TAEANTMDLR LILPIILLLV AAVLALLLRG
LLAPVLLVLS VIASFFASLG AAWLLFDHVL DFPALDSGVL LLAFVFLVAL GVDYNIFLVT
RAREDARHTG TRDGMLSALR VTGGVITSAG VLLAAVFAVL GVLPLILLTQ IGVIVCIGVL
LDTLLVRTVL VPALVFLLGD RFWWPGRPPA VAHGGASAIP APVPAHD
|
|---|
| |