Gene Strop_3112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3112 
Symbol 
ID5059576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3566694 
End bp3567479 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content78% 
IMG OID640475361 
ProductGTPase EngC 
Protein accessionYP_001159926 
Protein GI145595629 
COG category[R] General function prediction only 
COG ID[COG1162] Predicted GTPases 
TIGRFAM ID[TIGR00157] ribosome small subunit-dependent GTPase A 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.219047 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCG ACCTGACCGC CCTGGGCTGG GACGCCGACC GGGCACACGA CGCACGGCGG 
CGCGCCGACT GTCGGCCGGG TCGGGTGGCC TGGGTGGAGC GGGGGGTGTG CACCGTCCTC
GGTGCTGCCG GCCCGCTCCG CGCCACTCTC GGCGGGGCGC TGCTGGCCAC GGCCGCCCGG
GATCGGCGGC ACCTGCCGTG CGTGGGCGAC TGGGTGCTGC TCGCTACCTG GCCCGACCGG
CAGGTGACGC TCGAGGCGGT GCTGCCCCGG CGTACCACGT TGATGTGCCG GACCGCCGGC
GAGGCCGCCC ACGGGCAGGT GCTGGCGGCC AACCTGACCG CCGCGGCGGT GGTCGAGCCG
GTACGTCCAG AGCCCGACCT CGGGCGGATC GAGCGCCTGC TCGCGCTCGC CCACGAGTCG
GGTGCCCGGC CGCTGGTGGT GCTGACCAAG TCTGACCTGG TGGCCGATTC GGCGGCGGTG
GCGCGGCAGG TCGCGGCGGT GGCGCCGGGG GTGCCGGTGC TGCCGGTGAG CGCGAAGCGG
GGCGATGGGC TCGATCCGCT GCGCGCGGAG GTGGTGCCGG GCCGGACCCT CGGCTTGCTC
GGCCCGCCCG GGGCGGGCCG GTCGAGTCTG GTGAACACGC TGGCCGGCGC GGTGGTGCTG
CCGACGCCGA CGATCCGGCG GCTGGACGGC AAGGGCCGAC ACACCACCGC TGGGCGGGCG
CTGGTGGCGG TGCCGGGTGG GGGCGCGGTG CTGGAAGCCC CGGGGGTACG GGCGGTGGGC
GGCTGA
 
Protein sequence
MTIDLTALGW DADRAHDARR RADCRPGRVA WVERGVCTVL GAAGPLRATL GGALLATAAR 
DRRHLPCVGD WVLLATWPDR QVTLEAVLPR RTTLMCRTAG EAAHGQVLAA NLTAAAVVEP
VRPEPDLGRI ERLLALAHES GARPLVVLTK SDLVADSAAV ARQVAAVAPG VPVLPVSAKR
GDGLDPLRAE VVPGRTLGLL GPPGAGRSSL VNTLAGAVVL PTPTIRRLDG KGRHTTAGRA
LVAVPGGGAV LEAPGVRAVG G