| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3082 |
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| Symbol | |
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| ID | 5059546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3532315 |
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| End bp | 3533511 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640475332 |
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| Product | FeS assembly protein SufD |
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| Protein accession | YP_001159897 |
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| Protein GI | 145595600 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
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| TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0565637 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.317622 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACCC AGGCTTCCGC GCCGCCCAGC ACCAAGTCGC AGGCGCTGCG CTCATACGAT
GTCACCGACT TCCCGGCCCT CACCGGCCTG GAGGAGGAGT GGCGCTTCAC CCCGCTCAAC
CGCCTGCGGG GCCTGACCGG CGGGGTGCCG GCCAGCGCGG GCGCGGTCCG GTACGAGTAC
GGCGACCTGC CCGCGGGCGT CACCGTCGAG CCGGTCACGA AGGACGATCC GCGGATCGGT
AGCGTGCTGG TCCCGGTGGA CCGGATCAGC GCGCTCGCGT ACCGCGGTGC GGCGCAGGCG
CAGCTGGTGC GGGTCGCCGA CGAGGCCGTG GTGGCTGAGC CGGTGACCCT GCGGGTGGTC
GGCGAGGGCG CCGACGAGCT CGCCTTCGGG CACGCCTTCG TGGAGGTGGG CCGGTTCGCC
GAGGCGACCC TGGTGCTCGA GCACGTCGGT TCGGCGACGC TCGCCGACAA CGTCGAGGTT
TCGGTCGCCG ACGGCGCGAA GCTGACCCTG GTCACCGTCG CCGACTGGGC TGACGACGCG
GTGCAGGCGC AGCACCTGAA GGTGCGGCTG GGGCGTGCCG CCCGGGTACT GCACGTCCAG
GTCAGCCTCG GCGGCGACCT GGTCCGGCAG TACACCACGG TGGAGTACAC CGAGCGTGGC
GGTGAGGCCG AGCTGTACGG GGTCTACTTC GCCGACGAGG GGCAGCACCT GGAGCATCGA
CAGTTGGTGG ACCACTCGGT CCCGGACTGC CGCAGCTACG TGGGCTACCG GGGTGCCCTA
CAGGGCGAGA GCGCCCGTAC CGTCTGGGTG GGCGATGTGT TGATCCAGGC CGAGGCGACC
GGCACCGACA CCTACGAGAT CAACCGGAAC CTGCTGCTCA CCGACGGTGC GCGGGCGGAC
TCCATACCCA ACCTGGAGAT CGAGACCGGG GAGATTGCCG GCGCTGGTCA CGCGAGCGCG
ACCGGCCGCT TCGATGATGA GCAGCTGTTC TACCTGATGG CCCGGGGTAT CCCGGAGGCC
GAGGCGCGGC GCCTCGTGGT CCGCGGTTTC TTCGCCGAGC TGCTCAACAA GATCCCGGTC
GAGTCCCTGC GGGATCGGCT CGGCGCGGCG ATCGAGGCCC GGCTGGCCAG CGGGGGCAGC
GAGTTCGCGG ACCCCACGCA CGCGAGCGGG GACCTCGCCG CGAAGGCCGG TGCGTGA
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| Protein sequence | MTTQASAPPS TKSQALRSYD VTDFPALTGL EEEWRFTPLN RLRGLTGGVP ASAGAVRYEY
GDLPAGVTVE PVTKDDPRIG SVLVPVDRIS ALAYRGAAQA QLVRVADEAV VAEPVTLRVV
GEGADELAFG HAFVEVGRFA EATLVLEHVG SATLADNVEV SVADGAKLTL VTVADWADDA
VQAQHLKVRL GRAARVLHVQ VSLGGDLVRQ YTTVEYTERG GEAELYGVYF ADEGQHLEHR
QLVDHSVPDC RSYVGYRGAL QGESARTVWV GDVLIQAEAT GTDTYEINRN LLLTDGARAD
SIPNLEIETG EIAGAGHASA TGRFDDEQLF YLMARGIPEA EARRLVVRGF FAELLNKIPV
ESLRDRLGAA IEARLASGGS EFADPTHASG DLAAKAGA
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