Gene Strop_3072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3072 
Symbol 
ID5059536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3524400 
End bp3525167 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content72% 
IMG OID640475322 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001159887 
Protein GI145595590 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.381381 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0800108 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGCCG AGGCGACCGG GGTCCGGCTG GAGTGCGACG GGGCGGTGGC CACCGTCACG 
CTGGCTCGGC CTGACGTGCT CAACGCGCAG ACTCCGGCAC TGTGGCAGGC GGTGCGTGAC
TTCTCCCGGA AGCTCCCCGG TGACGTGCGC GTCGTGGTCG TCCGCGGTGA GGGCCGAGCC
TTCTCCGCCG GCCTTGACCT GTCGGTGGTG GGTGCTTCCG GTCCGGGCTC CTTCGCCGAG
CTGTCTACCC TGTCTGAGCA GGAGTGCGCG GACCGGATCG CCGAGTTCCA GGACGCCTTC
AACTGGCTGC ACCGCCCCGA CCTGGTGTCG ATCGCGGCGG TGCAGGGGCA CGCGATCGGC
GCCGGGTTTC AGCTGGCGCT CGCCTGTGAC CTGCGGGTTC TCGCCGAGGA TGTCCGGTTC
TCCATGGCCG AGGTGACGCT CGGCCTGGTC CCCGACCTGG CCGGCACCAA GCGTCTGGTC
GAACTCGTGG GCTACTCGCG GGCCCTGGAG ATCTGCGCCA CCGGGCGGCG GTTGGACGCT
GCCGAGGCGG ACCGGATCGG GCTGGCGACC CTGGTCGTGC CGACGGGGGA ACTGGCCGGT
GCGGTCAGCG ACCTGACGGC GGGGCTGCTC GCCAACGACC GGGAGGCGGT CGTAGAGATC
AAGGCGTTGC TCGCCGGCGC GTCTGGCCGT ACCCACGCCG AGCAGGAACG GGCCGAGCGG
GAGGCGCAGA CCCGGCGGCT GCGGGAACTC GCCGGCCGGG GGGAGTAA
 
Protein sequence
MTAEATGVRL ECDGAVATVT LARPDVLNAQ TPALWQAVRD FSRKLPGDVR VVVVRGEGRA 
FSAGLDLSVV GASGPGSFAE LSTLSEQECA DRIAEFQDAF NWLHRPDLVS IAAVQGHAIG
AGFQLALACD LRVLAEDVRF SMAEVTLGLV PDLAGTKRLV ELVGYSRALE ICATGRRLDA
AEADRIGLAT LVVPTGELAG AVSDLTAGLL ANDREAVVEI KALLAGASGR THAEQERAER
EAQTRRLREL AGRGE