| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3051 |
|---|
| Symbol | |
|---|
| ID | 5059515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 3488458 |
|---|
| End bp | 3489558 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640475301 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_001159866 |
|---|
| Protein GI | 145595569 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0899897 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTCGT TACCGTCAAC TCCTGACTTC GCCATCGTCG GCGGTGGAAT AGTCGGTGCC
TGCCTGGCAG AGGAGTTGAG TCGCCAGGGC GCCTCGGTCC TGGTGCTGGA CGCCGGCGCC
GAGCCCGGCC ACGCCACCCA CCGCGCGGCC GGGGTGGCGG TGCCCTCCCT GCGCTACCTG
GACGACCACG AGTTCTACTC CTGGCTGCGG GGCGCGAAGC TCGACCTGGA CGCCGACGTG
GCACGGCTGG AGCCGGAGTT CGGCACGTTC AGCGTGGTGC GGCCGATTCT GCGCGCCCTG
CGCGAGCAGG ACATCGAGAC CTACGGCCAC CTGTTGGCGG AGGCAGGGGC CGGGGCGCGG
GTCACCGGCG ACGACCTCGC CACTGTCGCG ACCGGCCTGA AGCTCCCGCC CAGCCGGCAC
TACCTACACG CCGAGGGCGG GCTCATGATC GACGGACGCC GGTATCTGGA CGCGGTTCTC
GGCCGCTGCC GGGAGCAGGG GGTCACCTGG CAACAGGGAC GTCGGGTACG CGAGGTGCGC
GAGGACGGGC ACCGGGTGAT GATTCGTACG GACCAGGAGA CACTGCACGC CGACCGGGTG
GTGATCGCCG CTGGCGCGTG GAGCTCCGGC ACCGGGCTGG CCGAGTCCAC CGGGATCCGG
CCGCAACGTG GTCAGATGGT GGTGCTGCGC ACCGACGAGA AGCTGTCCAG CATCCTCTCC
TCCGCCTACT ACCTCGCCCC GGGGGTTGGC GACGACATCC TCGTCGGCGC GACCGAGGAG
GATGCCGGTT TCGCCGATCA CGTCACCGCG CAGGGCATCG GAGCGCTGCT GCGGTTCGCC
ACCACCGCCA TGCCCGGGCT CGCCGCCTCC GTTCCCCTGG AACTGCGGGC GGGGCTGCGG
CCGGTCTCCG ACACAGGTCG GCCCTTGGCC GGAGCGCTGC CGGGCCACGA CCGGATCTTC
ATCTCGGCCG GACACGCCGG CCATGGGCTG CTCTCGGCCC GTACCACCGC GAAGGGGATG
GCCGCCGGGC TGCTCGGCGA CGACTGGGAC GCCCTGCCGT ACCGCATGTG CCCGACACAC
GCACAGGGAG GCACCGCGTG A
|
|---|
| Protein sequence | MLSLPSTPDF AIVGGGIVGA CLAEELSRQG ASVLVLDAGA EPGHATHRAA GVAVPSLRYL
DDHEFYSWLR GAKLDLDADV ARLEPEFGTF SVVRPILRAL REQDIETYGH LLAEAGAGAR
VTGDDLATVA TGLKLPPSRH YLHAEGGLMI DGRRYLDAVL GRCREQGVTW QQGRRVREVR
EDGHRVMIRT DQETLHADRV VIAAGAWSSG TGLAESTGIR PQRGQMVVLR TDEKLSSILS
SAYYLAPGVG DDILVGATEE DAGFADHVTA QGIGALLRFA TTAMPGLAAS VPLELRAGLR
PVSDTGRPLA GALPGHDRIF ISAGHAGHGL LSARTTAKGM AAGLLGDDWD ALPYRMCPTH
AQGGTA
|
|---|
| |