| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_3042 |
|---|
| Symbol | |
|---|
| ID | 5059506 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 3475046 |
|---|
| End bp | 3475660 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640475292 |
|---|
| Product | NADPH-dependent FMN reductase |
|---|
| Protein accession | YP_001159857 |
|---|
| Protein GI | 145595560 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0431] Predicted flavoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.953695 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTTCAGC TAACCACCAC CAGCAACGGT ACGAGCAGAG TCGGAAGCCG CACCGGCCCC
CTTGTCGTCG GCATCGGCGG CACCATGCGC CCCGGGTCCT CCACCGAGCA GGCAGTCCGG
GCGGTTTTGT CCGCCGCCGA GCAGGCCGGG GCCCGCACAC ACCTGCTCGG TGCCACCGCG
CTACAGCTGC CGTTGTATCT ACCCGGCGAA ACCCGGCGGA CGGCGGCGGC CCGGCAGTTC
GTCAACGCCG TACGCATCGC CGACGGGATC GTGATCGGGT CGCCGGCGTA CCACGGAGGT
ATCTCCGGCC TGGTCAAGAA CGCCCTCGAC TACATCGAGG ACCTACGCGA CGCGCCCCGC
CCCTATCTGC ATGGTCGAGC CGTCGGTTGT CTGGTCACTG CTCGCGGGTC CCAGGCCGCC
ACCACCCTCA CCAGCCTCCG CGCGGTGGTA CACGCACTCC GGGGCTGGCC GACGCCGCTC
GGCGTCGCGG TCAACACGGA GAACGTCACG TTCGCCGCTG ACGGCACCAC TACCGATTCG
CACATCTCTT CCCAGCTGTC CCTGATGGGA GAGCAGATCG TCGAGTTCGC TCTCGCCCGA
TCCACCGCAG CCTGA
|
|---|
| Protein sequence | MLQLTTTSNG TSRVGSRTGP LVVGIGGTMR PGSSTEQAVR AVLSAAEQAG ARTHLLGATA
LQLPLYLPGE TRRTAAARQF VNAVRIADGI VIGSPAYHGG ISGLVKNALD YIEDLRDAPR
PYLHGRAVGC LVTARGSQAA TTLTSLRAVV HALRGWPTPL GVAVNTENVT FAADGTTTDS
HISSQLSLMG EQIVEFALAR STAA
|
|---|
| |