Gene Strop_3021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_3021 
Symbol 
ID5059485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3453309 
End bp3454103 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content77% 
IMG OID640475271 
Producthypothetical protein 
Protein accessionYP_001159836 
Protein GI145595539 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.365476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.947396 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCC CCGCAGCGGG CGCGGTCACC CTCGCGCCAC GCCGGTCCAG CCGGTTCGTT 
GCCTGGGTGC GCGCGTGGCG TGCCGGGCTG GTGCCGTTCG ACGAAGTCGC CGACGCCATC
GCCGGTGACG AGGAGCATCT GGTTGCCGAC GCACCCGGAA CCTGGACCGA TGTCCCCCTG
CCCGAGGCCC TGCCCACGCT CGCCAAGCTC TCGCCCGACG TGATCCGCCT GGTGCTGCCC
GCGCCCGGTG ACCCGCGCGG GCTGCCCGGC CCGGGTGACT TCGCCGGTGC CGCTCTGCTC
GCCGCCGAGG GAGTGGTCGC CGGTGCGCTC GGCCTGGTCC CGCACCTACG CACGCACACC
TCCGGCTCCG GGGACGTCTT CGAGACCGTG CTGTGGCGGG TCTACCCGCT GCCGCCCGAC
GCGCCGGCCG CATCGCACCA TCTCCCCGGC GCGGCGGAGG CCGAGGCGGA GCTGGCCGCC
GCCCTCGCCG AGACCACCGC CACGCTGACC CGCCTCGACG TCGCCCAGTG GCGGCCGGAG
TTGGCCGGGG CGCTGGAGGC GCTGCGCCGT CCCGACGGCA CCACCGACCT GCCGCCCGGC
TTCGACCCCC GCGCCCGCCG GCTTTTCGCC CGCGCCGCCG TGCTGGATCG GGTGCTCGCC
CTGGCGGGGC AGGCCGCGCC GGGGGGCGCG GTCAACAACT ACGAGGCCCA GCAGCGCGAC
GCGGCGCTGC GCCCGTTGAC CAGCGCCTGT CGGCAGGCGC TGGCCGCCGC CTGCAACGCC
CCGCTACGCC CGTAG
 
Protein sequence
MSTPAAGAVT LAPRRSSRFV AWVRAWRAGL VPFDEVADAI AGDEEHLVAD APGTWTDVPL 
PEALPTLAKL SPDVIRLVLP APGDPRGLPG PGDFAGAALL AAEGVVAGAL GLVPHLRTHT
SGSGDVFETV LWRVYPLPPD APAASHHLPG AAEAEAELAA ALAETTATLT RLDVAQWRPE
LAGALEALRR PDGTTDLPPG FDPRARRLFA RAAVLDRVLA LAGQAAPGGA VNNYEAQQRD
AALRPLTSAC RQALAAACNA PLRP