| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2979 |
|---|
| Symbol | |
|---|
| ID | 5059443 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 3407406 |
|---|
| End bp | 3407999 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640475230 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001159795 |
|---|
| Protein GI | 145595498 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2068] Uncharacterized MobA-related protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.220075 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCATCG CCGCGGGTGG TGGGCGCCGG ATCGGTGGCC CCGAGGCGCT GCTGTGCCAG
GGCGAGAGAC CACTCGTCTG TACGATGATC GACACGATGG CGGCGGCGGG CTGCGAGCAG
ATCGTAGTCG TCCTCGGAGC CGCCGCCGAC CAGGTACAGG AAACCGCTGA CCTCACCCGG
GCCACCGTCG TGGTGAACCG AGCCTGGGGA ACCGGGGTGG GTTCCTCCAT CAAGGCCGGC
CTTGCGGCCA TCGACGACGA CGCCGTCGAG GCGGTGGTTG TCGTTCCGGT GGACATGCCG
GGCCTGACCG CCGGGGCGGT CCAGCGGGTC GCCGCGCTGC CGTACCCGGA CGTGCTGGTC
TGCGCCACCT ACGGCGGACT GCGCGGCTAC CCGATGCTCT TCGGCCGCCG GCACTGGTCC
GGCATCGCCA CGCTGGCCAG CGCGGATGTC GGTGCCCGTC CGTACCTGCT GGCGCACAAG
GATCAGATCG TCGACATCTC CTGTGACACC GTCGCCGACG GCAGTCGGGT CGACAGCCCG
GAGTTGATGG CCCTGTACGG GTTAACCGTC CCACCGCAGC GGGTCGGCGC GTAG
|
|---|
| Protein sequence | MIIAAGGGRR IGGPEALLCQ GERPLVCTMI DTMAAAGCEQ IVVVLGAAAD QVQETADLTR
ATVVVNRAWG TGVGSSIKAG LAAIDDDAVE AVVVVPVDMP GLTAGAVQRV AALPYPDVLV
CATYGGLRGY PMLFGRRHWS GIATLASADV GARPYLLAHK DQIVDISCDT VADGSRVDSP
ELMALYGLTV PPQRVGA
|
|---|
| |