Gene Strop_2951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2951 
Symbol 
ID5059415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3370996 
End bp3373284 
Gene Length2289 bp 
Protein Length762 aa 
Translation table11 
GC content68% 
IMG OID640475202 
Productcellulose 1,4-beta-cellobiosidase 
Protein accessionYP_001159767 
Protein GI145595470 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCCCA ATCCACCGGC CGGCCGGAGG CGACGCGCCG CGCCGCTCGC CGCCGGCATC 
GTCGTCGCGC TCGCCGTCAG CGGGCTCACC GGCGGCAACG CGCAGGCCGA CGCCGTGGAG
CAAATCGTCA ACGGCACCTT CGACGACGGC CACGTGCCCT GGTGGTCCAC CGCCAACCTC
ACCCTCGACT CCAGCGACGG CAGGCTCTGC GCCGACGTGC CCGGCGGCAC GATCAACCCG
TGGGACGCCA TCATCGGCCA GGACGACATC GCCCTCCAAG CCGGCGCTAC CTACGAGTTC
CGGTTCTTCG GTAGCGCCAC CCCGGGCAAG GTCGGCAAGG CGCTGATCCA ACTCCCGGTC
GCCCCGTACA CCCAGTACCT CGCCGCCAAC CCGGCGCTGA ACGTCTCCGG CGACAGCTAC
CGCTACACCT TCACCTCCCC GGTCGACCTG CCGAACGCCC AGGTCGCGTT CCAGATCGGC
GGCAGTACCC AGCCATGGCG GATCTGCCTG GACGACATCA GCCTGACCGG GGACGCCGAG
CCGGACGTGT ACGAGCCGGA CACCGGCCCA CGGGTACGCG TGAACCAGGT CGGCTACCTG
CCCAGGGGGC CGAAAAACGC CACGGTCGTC ACGGAAGTAG CCGAAGCGCT GCCCTGGCAA
CTCAGGAACG ACGCCGGGAC CGTCGTGGCC AGCGGCACCA CCCAACCTCG TGGGCTGGAT
GAGTCGTCCG GGCAACGGGT ACACAGCATT GACTTCGGCG ACCACCAGAA GAGGGGCACC
GGCTACACCC TCACCACTGA CGGAGACACC AGCCGGCCCT TCGACATCGG CACCGGCTTC
TACGAGCAGC TCCGGCTCGA CGCGCTCAGG TTCTACTACA CCCAGCGCAG CGGCGTGGAG
ATCCGCGAGG ACCTGCGCCC CGGCTACGGC CGACCGGCCG GGCACATCGG TGTCGCCCCC
AACCAGGGAG ACGTGTCGGT TCCCTGCCAG CCCGGGGTCT GCGAGTACTC ACTGGACGTC
TCCGGCGGCT GGTACGACGC GGGTGACCAC GGCAAGTACG TCGTCAATGG CGGTATCTCC
GTACATCAGC TGATGAGCGA GTACGAGCGC TCCCTCCTGG CCCGAACCGG TGAGCTGTGG
AAGCTGCGCG ACGGCACCCT CGACCTGCCG GAGAGCGGTA ACTGGGTGCC GGACATTCTC
GACGAGGCCC GCTGGGAACA GGAGTTCCTG CTCAAGATGC AGGTACCGGC GGGGCAGCCC
TACGCCGGCA TGGTCCACCA CAAGATCCAC GACGACTCCT GGACAGGGCT GCCGCTCCTA
CCCCACCTCG ACCCGAAGCG CCGCGAGCTG CACCCGGTCT CCACCGCGGC GACGCTCAAC
CTGGCCGCCA CCGCCGCCCA GGCCGCACGG GTCTACCTGC CCTACGACTG GCGGTTCGCC
CTGGAGAACC TCAGAGCCGC GAAGACGGCG TGGGCGGCGG CGACATCCAA CCCCGCGATG
TACGCCGACC CGAACGACGG CAACGGCGGT GGCGCGTACG CTGACGACAA CGTCACCGAT
GAGTTCTACT GGGCCGCCGC CGAACTGTTC ATCACCACCG GCGCCGGCGA ATACCGGGAC
TTCCTGCTCG CCTCCCCGCT GCACACCACG GACGTCTGGC GGGATCGGGG CTTCGACTGG
GGCAACACGG CTCAGCTCGG CCGACTCCAG CTGGCGACCC TGCCCAACCG CCTACCTGAC
CGGGAACGAA TCCGGCAGTC GGTCGTCACC GGCGCCGACA CGTATCTCGC CACGATGGAG
GCACACCCGT ACGGCATCCC GTACGCACCC ACGGACAACA CCTACGACTG GGGATCCAAC
AACCTGATCC TGAACAACGC CATCGTGATG GCCGTGGCGT TCGACATCAC CGGCACCGAC
CGCTACCGCG ACGGTGTCCT GGAGACCATG GACTACATCT TCGGGCGCAA CGCTCTCAAC
CAGTCCTACG TGACCGGGTA CGGCGAGGTG GCGTCGGAGA ACCAGCACAG CCGCTGGTAC
GCCCACCAAC TCAACACCGA TCTGCCCAAC CCGCCGCGCG GCACCCTGTC CGGCGGTCCC
AACTCGAGCA TCCAGGACCC GGTCGCCCAG CAGAAACTCC AGGGTTGCGC GCCGCAGTTC
TGCTACCTCG ACGACATCGA ATCCTGGTCG ACCAACGAGT TGACCATCAA CTGGAACGCA
CCGCTGGCCT GGCTCGCCGC TTTCGTCGCC GACCAGGACA ACGGCGACGC CCGCGGTCGG
CTGCGTTAG
 
Protein sequence
MSPNPPAGRR RRAAPLAAGI VVALAVSGLT GGNAQADAVE QIVNGTFDDG HVPWWSTANL 
TLDSSDGRLC ADVPGGTINP WDAIIGQDDI ALQAGATYEF RFFGSATPGK VGKALIQLPV
APYTQYLAAN PALNVSGDSY RYTFTSPVDL PNAQVAFQIG GSTQPWRICL DDISLTGDAE
PDVYEPDTGP RVRVNQVGYL PRGPKNATVV TEVAEALPWQ LRNDAGTVVA SGTTQPRGLD
ESSGQRVHSI DFGDHQKRGT GYTLTTDGDT SRPFDIGTGF YEQLRLDALR FYYTQRSGVE
IREDLRPGYG RPAGHIGVAP NQGDVSVPCQ PGVCEYSLDV SGGWYDAGDH GKYVVNGGIS
VHQLMSEYER SLLARTGELW KLRDGTLDLP ESGNWVPDIL DEARWEQEFL LKMQVPAGQP
YAGMVHHKIH DDSWTGLPLL PHLDPKRREL HPVSTAATLN LAATAAQAAR VYLPYDWRFA
LENLRAAKTA WAAATSNPAM YADPNDGNGG GAYADDNVTD EFYWAAAELF ITTGAGEYRD
FLLASPLHTT DVWRDRGFDW GNTAQLGRLQ LATLPNRLPD RERIRQSVVT GADTYLATME
AHPYGIPYAP TDNTYDWGSN NLILNNAIVM AVAFDITGTD RYRDGVLETM DYIFGRNALN
QSYVTGYGEV ASENQHSRWY AHQLNTDLPN PPRGTLSGGP NSSIQDPVAQ QKLQGCAPQF
CYLDDIESWS TNELTINWNA PLAWLAAFVA DQDNGDARGR LR