Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2910 |
Symbol | |
ID | 5059374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 3325518 |
End bp | 3326801 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640475161 |
Product | fibronectin, type III domain-containing protein |
Protein accession | YP_001159726 |
Protein GI | 145595429 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.908069 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCCGCGG CGCAGCATCG GGCTCTCGCC CTGCGCCACA CCGGTGACCT GGCCGGCGCG CGTCGACTAC TCACCGACAC CGTGGAGTCG GGCCACCCGC CACCGTACGG CCCGGATCAT CCCGAGGTGT TGAAGGCCGC GCACCTCCTG GCACGACTAC ACCGGGAGGC CGGCGACCCG AGCGCCGCCC GCCGGGTGTT GGAGGAGGCG CTCGCGGCGG GCGAGCGCCT CCGGTCGGAC GCCGACCCCC TGCTGCTGGC GCTCGTCTTC GAGCTGGCCT CCGTGGCGGA CGAACTCGGC AACCGACACG AGGCCCGCCG TAACTTCCGC CGGATCGTGA CCGCCGGGCC GGCAGCGCTC GGGGCCGACC ATTCGTCGGT CCGCGCGGCG TGGGCCTACC TCAACGAGGC CAATCTGACC GACGGCTCGT CCGGTACGCC GGGTCCTGTG CTCCCCGGCC AGTACGATTC GGGGCGCCCG GGGGCCGGGA CGGTCGCGGC GCCAACCGCG GACGGTCGAC TGGCGCAGAC ATCGACTCCA CCGAACACCG CGCCAGCATC GCCAGGCCCT GGGCCAGCAT CGCCGGGTCC GTCTCCCGAC AGTGCCGGCC ACGCGGCGCC GCACCGGCCG GCGGTCGGCC CGGTACCGGA CGGGCACGGC GACGGTGGAC GACCCCGACC GGGCCGACCC CGGGGGTCGG GATCCACCCA CGGCTCCTTC GGCACCCGCC CCGCGCCTGG AGCCCCCGCC AGTGGCCCCA CGCCAAACTC GCCGCGGATG ACTGATGACA CCGTTGTCGG CCTGCTGCCT CCCGCGTACC GGGGACGGGA GCCGGAGCGG CGCAGCCGGA ACCGGACGGC GGTGGTCGCG GTGCTCGTCG CGGCGGGGGT GGCCGCGGTG GCGGTCGCCG GAGCGGGCGT GGTGGTGCTT CTTCGGGGAG CCCCGGCTTC TTCTCCTACG TCGGACACGT CGAGGGCGTC GGCGACGGGG GCGCCGAGCG GAGTGCCGAG CGAGGCGCCG CCGACGGACC TTAGTTTGCG GGACGACTCA ACCTCGGTCA CTCTCACCTG GACGGACCCG TCCGGCGGTA CCGTTCCGTT CGTGGTGGCC GCTGGTCGGG CGGGGCAGCA GCTGGCGCCG AAGGATCGGG TGGATCCGGG GCGGACCAGC TACACGATCA ATGGTTTGAG TGCCGAGGTG GACTACTGCT TCACGGTGCT GGCGGTGTAC TCGGCGGAGA CGATCACCAC GTCTGGGCAG GTGTGCACCA ATCGCGAGCA ATAG
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Protein sequence | MAAAQHRALA LRHTGDLAGA RRLLTDTVES GHPPPYGPDH PEVLKAAHLL ARLHREAGDP SAARRVLEEA LAAGERLRSD ADPLLLALVF ELASVADELG NRHEARRNFR RIVTAGPAAL GADHSSVRAA WAYLNEANLT DGSSGTPGPV LPGQYDSGRP GAGTVAAPTA DGRLAQTSTP PNTAPASPGP GPASPGPSPD SAGHAAPHRP AVGPVPDGHG DGGRPRPGRP RGSGSTHGSF GTRPAPGAPA SGPTPNSPRM TDDTVVGLLP PAYRGREPER RSRNRTAVVA VLVAAGVAAV AVAGAGVVVL LRGAPASSPT SDTSRASATG APSGVPSEAP PTDLSLRDDS TSVTLTWTDP SGGTVPFVVA AGRAGQQLAP KDRVDPGRTS YTINGLSAEV DYCFTVLAVY SAETITTSGQ VCTNREQ
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