Gene Strop_2903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2903 
Symbol 
ID5059366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3319015 
End bp3320583 
Gene Length1569 bp 
Protein Length522 aa 
Translation table11 
GC content71% 
IMG OID640475154 
Productalpha/beta hydrolase fold 
Protein accessionYP_001159720 
Protein GI145595423 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGTGT GGCCGACCGT GGTTACCCGT CCTCTGCAGT TAGCTCCCCG TCTCCACGGG 
GCTGGCGCGC CGACCGTGGT GTTCGTCGCC GGCTTGGGCG ATCGTGGGGC GACCTGGGAC
GCGGTCCGCG ACCGCCTCTC GGGGGTGTCG ACGCTTGCGT ACGACCGGGC CGGCACCGGG
GAGATCCCAC CCCCGGCCGA CGTACGTACC TGCGCCGACC TGGCGGACGA GCTGGCCGCC
CTGCTCAAGG AGCTCGACCC GCCCGCGCCG TGGCTGCTGG TCGGGCACTC CTTCGGCGGT
CTTGTGGCCC GGCTGTATTG CGCCCGCCAC CCGGGTCGCG TGGCTGGCCT GATTCTCGTC
GACGCCGTCG TGGAGGGCCG GGAGATTGCC TACGACCCGC TGCTGCCGCC GCCGCTGCGA
GCGGCCAACC ATGCATACCT GACCGACCCG GACCGGAATC CGGAGCGGAT CGACAAGCAG
GCCAGCTATC GCCAGGTGGC CGGCTGTGCG CTGCCTGCCG GACTGCCGGT GAGCGTCGTG
ACCCGCGGCC GACCAGACAC CGACCCGGAC CGGCCGGTGC GTGACCTGCA CCGCGTCGAT
CAGCGGATGC AGCACGACCT GGCGCGGCGT CTGGGGGCCC GGCAGCGGAT CGCTGTCCGC
AGCGGCCACG ACGTCCACCA CGACGAACCT GACCTGGTCG CGGGGGAGAT CATCATGATG
CTGAAGGGGG CCACGACGGT GAGCGGGGCC GGGAGTCGGC TGTTGGCGGA CCTGCGGCGG
ATCGAGGAGG ACGGCTTCCG GCTGCGGCCC GACGAGCGGC CCGCGGACCT GGTGGCCCTG
ATGCTCACCC ACATCGGTGA TCTCGAGTCC GACTTGCGGG AGCTGATCTA TGCGGTCTTC
CACACCCTGG TCACCGGTGA TCACCTCACC GAGGCCGAGT TGCGGGACCT GCTCATCGTC
CTGACCGACG ACGGGCACCT GTTTCACGGC ATCGGTGGAC ACGGCGAGCC CACCGTGTTC
ACGCGTACCT TCTCGGCGCT GGTCATTGCG CTGGTGCTCG CCCGGCACCG CCGCCGGCCG
TTCCTGACCG TCGACGAGTA CGGCCACGTC CGGGACGCCC TGCTGCGTTA TCACCGCGAG
GAACGGGACC TGCGCGGCCT GGTCGACGAA GGCGGGTGGG CGCACGCCGC CGCGCACGGC
GCGGACGCCC TCGCTGAGCT GGTGCGCTGC CAAGATGTAG ACGTGGAGAC ACAGCGTGCC
GTGCTCGCCG CGTTGCGCGG CGTCCTGCAC AACGGCACGA CGATCTTTCC CGACGAGGAC
GACGAGCGGA TCGCCACCGT GGTAGATGCC ATCGTCACGC ACGGACCGCT GCCCGAGCCG
GAGGTCGTCG CCTGGCTGCG GACGCTGGCC GACTGCGCCG ACCGGCCGCG CGGCCGCGCC
CAGACGGTCG ACCGGGTCAA CACCCGCAAC CTCGTGCGCA GCCTATGGTT CCGGCGTCCC
CACGACGGCG CCATCGCCGG CGCGTTGGCC GACGTCGAGG CCCGGGTGAA CAAGTACCGG
GTCGGCTGA
 
Protein sequence
MLVWPTVVTR PLQLAPRLHG AGAPTVVFVA GLGDRGATWD AVRDRLSGVS TLAYDRAGTG 
EIPPPADVRT CADLADELAA LLKELDPPAP WLLVGHSFGG LVARLYCARH PGRVAGLILV
DAVVEGREIA YDPLLPPPLR AANHAYLTDP DRNPERIDKQ ASYRQVAGCA LPAGLPVSVV
TRGRPDTDPD RPVRDLHRVD QRMQHDLARR LGARQRIAVR SGHDVHHDEP DLVAGEIIMM
LKGATTVSGA GSRLLADLRR IEEDGFRLRP DERPADLVAL MLTHIGDLES DLRELIYAVF
HTLVTGDHLT EAELRDLLIV LTDDGHLFHG IGGHGEPTVF TRTFSALVIA LVLARHRRRP
FLTVDEYGHV RDALLRYHRE ERDLRGLVDE GGWAHAAAHG ADALAELVRC QDVDVETQRA
VLAALRGVLH NGTTIFPDED DERIATVVDA IVTHGPLPEP EVVAWLRTLA DCADRPRGRA
QTVDRVNTRN LVRSLWFRRP HDGAIAGALA DVEARVNKYR VG