Gene Strop_2818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2818 
Symbol 
ID5059281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3222756 
End bp3223883 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content70% 
IMG OID640475071 
Productthiazolinyl imide reductase 
Protein accessionYP_001159637 
Protein GI145595340 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4693] Oxidoreductase (NAD-binding), involved in siderophore biosynthesis 
TIGRFAM ID[TIGR01761] thiazolinyl imide reductase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCC CCACCCGTGT GGTCGTCTGC GGCACGCGGT TTGGTCAGGT CTATCTGGAA 
TCGTTCCGTC AGGCCGATCC GGGTTTCCAG CTCGCTGGTG TCCTCGCCGG CGGCAGCACC
CGGTCTCGGA TCTGCGCCGA GCACTACGGG GTGCCGCTGT ACACCGGCGT CGACCAGCTG
CCGGACGACA TCGACATCGC CTGCGTGGTG ATCCGTGGAG GGCTGCTCGG CGGGCGGGGC
TCCGAGCTGG CGATGGAGCT GATGGCCCGG GGCATCCACG TGCTCCAGGA GCACCCGCTG
CACCACGACG AGTTGGCCCG CTGCCTCCGG CAGGCCCGCA AGCACGCGGT GGTCTACCAA
CTCAACCCGT TCTACCGGCA CATCACGCCG GTACGCCGGT TCCTCGGCGC GGCCCGCGAA
CTGCTACGCC GACAGCCGGC CCGCTACATC GACGCGGCCT GCGGCTTTCA GCTGGCGTAC
TCCCTGCTGG ACCTGCTTGG CCAGGCCCTC GGTGGGGTGC GGCCCTGGCG GTTCACCGAT
CTGCCCCCGC TACCGGCGGC GGTGACCGGC GCGACCGGTC TGGACCTGCC GTTCCGTAGC
CTCGACGGGG TGCTGGCCGG TGTGCCGATC ACTCTCCGGG TGCAGAACCA GATGGATCCG
GCCGACCCGG ACAACTACGC GCACCTCATG CACCGGGTCA CCATCGGCAC CGAAGCCGGC
AATCTGTCCC TGGTCGGCAC CCACGGTCCG ACGGTGTGGA CGGCCCGTCC CGACTTCCCG
CGGGAAGTCG CGGGGATCGG CGCCGACCCG CATTTCGCCG GGATGCGCGA CACCAGCACC
CCCAGCGCGA CCGTGTTCGG CCCGACCGAG GTGCCGCACT ACGACACTGT CTTCGGCACC
ACCTGGCCGG AGGGCGTACG ACGGGCACTG CGGGTGCTAC GGGACACCGT CGAGTGCGGT
GAGGACCCGC TGCGGCAGGG CCAGTACCAC CTCACCCTCT GCCAGCTCTG GCAGGAGCTG
ACGGTGATCC TGGGCCCACC TGACTTGCTG ACGGCGGACG CGCCCCGGAT GCTCGGCGTC
GATGACCTGA AGGCGCTCGC GGCCGCCGGC GACGCGGCGG TGAGTTGA
 
Protein sequence
MNRPTRVVVC GTRFGQVYLE SFRQADPGFQ LAGVLAGGST RSRICAEHYG VPLYTGVDQL 
PDDIDIACVV IRGGLLGGRG SELAMELMAR GIHVLQEHPL HHDELARCLR QARKHAVVYQ
LNPFYRHITP VRRFLGAARE LLRRQPARYI DAACGFQLAY SLLDLLGQAL GGVRPWRFTD
LPPLPAAVTG ATGLDLPFRS LDGVLAGVPI TLRVQNQMDP ADPDNYAHLM HRVTIGTEAG
NLSLVGTHGP TVWTARPDFP REVAGIGADP HFAGMRDTST PSATVFGPTE VPHYDTVFGT
TWPEGVRRAL RVLRDTVECG EDPLRQGQYH LTLCQLWQEL TVILGPPDLL TADAPRMLGV
DDLKALAAAG DAAVS