Gene Strop_2789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2789 
Symbol 
ID5059252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3191395 
End bp3192099 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content72% 
IMG OID640475042 
ProductDSBA oxidoreductase 
Protein accessionYP_001159608 
Protein GI145595311 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3917] 2-hydroxychromene-2-carboxylate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCGTC GACCTCGCCT CTACTTCTCG TTTCGCAGCC CGTACAGCTG GCTGGCGGTG 
CACCGGCTGC GGCAGGCGGT GCCGGACGTG TTCGACCGGC TCGACTGGTA CCCGTACTGG
GACCCGGACA CGAGGACCTC GGCCACGCTG GCGGAGCGGG GGGCGGAGTT CCACTACGTG
CAGATGAGCC GGGCCAAGCA CCGGTACCTC CTGCTGGACA CCAAGCGGCT GGCGGAGCAG
ATGGGCCTGG CGATGGCCTG GCCGATCGAT GTCGACTCCT GGTGGGAGCT GCCACATCTG
GCCTGGCTCT GGGCCCGTCG GCAGGGGCGG GCGGTGCAGT TCTACGACGC TCTGGTGACG
GAGCGCTGGG CGCGCGGTGC GGACATCTGC ACGCCCGAGG TGCTCGGTCG GGCTGCCCTG
GCGGCCGGCC TCGACGTGGC CGGCGCCCAG GCCGCCCCGG ACGACGAGCA GATCCGGGAA
GAGGGGGCCG GGTGCCTGGT CACCGCGTAC GAGGACGACG TGTTCGGCAT TCCGTACCTC
CGGTGGGGCC GGCACCGGTT CTGGGGCCTG GACCGGGTCG ACCACTTCCT GCGCGCCTGG
CAGCCTGCCG CCGAGGCGAA CCACATCGGG TCGGCCACCG ACCCGATGGC CGGTGTCCCG
GCGGGCGCAT CCTTCGACAC CGACACCGCG GGAGGCTGCG GATGA
 
Protein sequence
MKRRPRLYFS FRSPYSWLAV HRLRQAVPDV FDRLDWYPYW DPDTRTSATL AERGAEFHYV 
QMSRAKHRYL LLDTKRLAEQ MGLAMAWPID VDSWWELPHL AWLWARRQGR AVQFYDALVT
ERWARGADIC TPEVLGRAAL AAGLDVAGAQ AAPDDEQIRE EGAGCLVTAY EDDVFGIPYL
RWGRHRFWGL DRVDHFLRAW QPAAEANHIG SATDPMAGVP AGASFDTDTA GGCG