Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2771 |
Symbol | |
ID | 5059234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 3141398 |
End bp | 3142744 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640475025 |
Product | hypothetical protein |
Protein accession | YP_001159591 |
Protein GI | 145595294 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1509] Lysine 2,3-aminomutase |
TIGRFAM ID | [TIGR00238] KamA family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00250775 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCCTGC TCGTTTCCAC GACCTCCGAT CCGGGGCGGT TCCGCTCCTT CGGGCCGCAC CATATCGACG AACTGGGCGC CCGCTATGGA TTGTCGGCCG ACAATGTGCG CGCGATCCGC ACCATTTCCC GGGTGCTGCC GTTCCGGGTC AACGAATACG TCCTGTCGCA CCTGATCGAC TGGGACCGCA TTCCGGACGA CCCAATCTTC CGATTGGTGT TCCCACAGCG TGGCATGCTC GCCGCCGCCG ACGAACGACT CCTCGGTGAC CTACTGGGCG CCGGCGACCG CACGGGGCTG CGCGTGGAGG TGGCCCGGAT CCGGGCCGGG CTCAACCCGC ACCCGTCCGG GCAGCAGCAG CACAACGTGC CGCACCTGGA TGGTCACGAG CTGCCCGGCA TGCAGCACAA GTACCGGGAG ACGGTGCTGT ACTTCCCCCA GCAGGGGCAG ACGTGCCACG CCTACTGCAC CTACTGCTTC CGCTGGGCGC AGTTCGTCGG CGACGCCGAT CTGCGGTTCG CCGCGCCGGG CCCGGAGCAG CTGGTGACGT ATCTGCACCG GCACCCGGCG GTGACCGACG TGCTGGTCAC CGGCGGCGAC CCGATGATCA TGTCGACGGA GCGGCTGCGC AGCCACGTGG AACCGCTGCT ACGGGTGGAC ACGGTGCGCA CCGTCCGCTT CGGCACCAAG GCGGTGGCCT ACTGGCCGTA CCGGTTCGTC TCCGACAGCG ACGCCGACGA CCTGCTGCGG CTGTTCGCAC AGGTGGTCGC CGCCGGCCGC AACGTCGCGG TGATGGCGCA CTTCAGCCAC CCGCGTGAGC TGGCCACCGA GATCGCCACG CGGGCCATCG CCCGGATCCG GTCGACCGGG GCGGTGGTCT ACTGCCAGGC CCCGCTGATC CGCTACGTCA ACGACGACCC CCATGCCTGG AGCGACATGT GGCGGGCCGA GCTGGCTCTC GGCGCGGTGC CCTACTACAT GTTCGTCGAG CGGGATACCG GGCCTCGGGA CTACTTCCAG GTGCCGCTCA CCCGCGCCGC CGACATCTTC CGTACCGCCT ATCAGGACCT GCCCGGCCTG GCCCGGACCG TGCGGGGGCC GGTCATGTCG GCGACCCCCG GCAAAGTCCT GGTCGACGGC GTCGAGCGGA CCCCGCACGG CGAGTTCTTC CAACTCCGGT TGATCCAGGC CCGCGACCGC CGGCTGGTCG GCCGGCCGTT CCGGGCCCGG TGGTCGGCGG ACGCGGCGTG GTTGAGCGAC CTACAGATCG ACCCGGCCGC CCCAGCGGAC ATCCTCGCCG CGGTCAGCCC CAGCGCGGCC CGCCCCGGCG CGGCCGTCAC CGCCTGA
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Protein sequence | MSLLVSTTSD PGRFRSFGPH HIDELGARYG LSADNVRAIR TISRVLPFRV NEYVLSHLID WDRIPDDPIF RLVFPQRGML AAADERLLGD LLGAGDRTGL RVEVARIRAG LNPHPSGQQQ HNVPHLDGHE LPGMQHKYRE TVLYFPQQGQ TCHAYCTYCF RWAQFVGDAD LRFAAPGPEQ LVTYLHRHPA VTDVLVTGGD PMIMSTERLR SHVEPLLRVD TVRTVRFGTK AVAYWPYRFV SDSDADDLLR LFAQVVAAGR NVAVMAHFSH PRELATEIAT RAIARIRSTG AVVYCQAPLI RYVNDDPHAW SDMWRAELAL GAVPYYMFVE RDTGPRDYFQ VPLTRAADIF RTAYQDLPGL ARTVRGPVMS ATPGKVLVDG VERTPHGEFF QLRLIQARDR RLVGRPFRAR WSADAAWLSD LQIDPAAPAD ILAAVSPSAA RPGAAVTA
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