Gene Strop_2771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2771 
Symbol 
ID5059234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp3141398 
End bp3142744 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content71% 
IMG OID640475025 
Producthypothetical protein 
Protein accessionYP_001159591 
Protein GI145595294 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1509] Lysine 2,3-aminomutase 
TIGRFAM ID[TIGR00238] KamA family protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00250775 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCCTGC TCGTTTCCAC GACCTCCGAT CCGGGGCGGT TCCGCTCCTT CGGGCCGCAC 
CATATCGACG AACTGGGCGC CCGCTATGGA TTGTCGGCCG ACAATGTGCG CGCGATCCGC
ACCATTTCCC GGGTGCTGCC GTTCCGGGTC AACGAATACG TCCTGTCGCA CCTGATCGAC
TGGGACCGCA TTCCGGACGA CCCAATCTTC CGATTGGTGT TCCCACAGCG TGGCATGCTC
GCCGCCGCCG ACGAACGACT CCTCGGTGAC CTACTGGGCG CCGGCGACCG CACGGGGCTG
CGCGTGGAGG TGGCCCGGAT CCGGGCCGGG CTCAACCCGC ACCCGTCCGG GCAGCAGCAG
CACAACGTGC CGCACCTGGA TGGTCACGAG CTGCCCGGCA TGCAGCACAA GTACCGGGAG
ACGGTGCTGT ACTTCCCCCA GCAGGGGCAG ACGTGCCACG CCTACTGCAC CTACTGCTTC
CGCTGGGCGC AGTTCGTCGG CGACGCCGAT CTGCGGTTCG CCGCGCCGGG CCCGGAGCAG
CTGGTGACGT ATCTGCACCG GCACCCGGCG GTGACCGACG TGCTGGTCAC CGGCGGCGAC
CCGATGATCA TGTCGACGGA GCGGCTGCGC AGCCACGTGG AACCGCTGCT ACGGGTGGAC
ACGGTGCGCA CCGTCCGCTT CGGCACCAAG GCGGTGGCCT ACTGGCCGTA CCGGTTCGTC
TCCGACAGCG ACGCCGACGA CCTGCTGCGG CTGTTCGCAC AGGTGGTCGC CGCCGGCCGC
AACGTCGCGG TGATGGCGCA CTTCAGCCAC CCGCGTGAGC TGGCCACCGA GATCGCCACG
CGGGCCATCG CCCGGATCCG GTCGACCGGG GCGGTGGTCT ACTGCCAGGC CCCGCTGATC
CGCTACGTCA ACGACGACCC CCATGCCTGG AGCGACATGT GGCGGGCCGA GCTGGCTCTC
GGCGCGGTGC CCTACTACAT GTTCGTCGAG CGGGATACCG GGCCTCGGGA CTACTTCCAG
GTGCCGCTCA CCCGCGCCGC CGACATCTTC CGTACCGCCT ATCAGGACCT GCCCGGCCTG
GCCCGGACCG TGCGGGGGCC GGTCATGTCG GCGACCCCCG GCAAAGTCCT GGTCGACGGC
GTCGAGCGGA CCCCGCACGG CGAGTTCTTC CAACTCCGGT TGATCCAGGC CCGCGACCGC
CGGCTGGTCG GCCGGCCGTT CCGGGCCCGG TGGTCGGCGG ACGCGGCGTG GTTGAGCGAC
CTACAGATCG ACCCGGCCGC CCCAGCGGAC ATCCTCGCCG CGGTCAGCCC CAGCGCGGCC
CGCCCCGGCG CGGCCGTCAC CGCCTGA
 
Protein sequence
MSLLVSTTSD PGRFRSFGPH HIDELGARYG LSADNVRAIR TISRVLPFRV NEYVLSHLID 
WDRIPDDPIF RLVFPQRGML AAADERLLGD LLGAGDRTGL RVEVARIRAG LNPHPSGQQQ
HNVPHLDGHE LPGMQHKYRE TVLYFPQQGQ TCHAYCTYCF RWAQFVGDAD LRFAAPGPEQ
LVTYLHRHPA VTDVLVTGGD PMIMSTERLR SHVEPLLRVD TVRTVRFGTK AVAYWPYRFV
SDSDADDLLR LFAQVVAAGR NVAVMAHFSH PRELATEIAT RAIARIRSTG AVVYCQAPLI
RYVNDDPHAW SDMWRAELAL GAVPYYMFVE RDTGPRDYFQ VPLTRAADIF RTAYQDLPGL
ARTVRGPVMS ATPGKVLVDG VERTPHGEFF QLRLIQARDR RLVGRPFRAR WSADAAWLSD
LQIDPAAPAD ILAAVSPSAA RPGAAVTA