| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2761 |
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| Symbol | |
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| ID | 5059224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3108746 |
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| End bp | 3111577 |
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| Gene Length | 2832 bp |
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| Protein Length | 943 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640475015 |
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| Product | regulatory protein, LuxR |
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| Protein accession | YP_001159581 |
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| Protein GI | 145595284 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.208507 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00706127 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGGATTCG TAGAGAGAAG CCGCGAGCTC GACATCTTGC GGGACCTTTA CGCCGTATGC
GCCACGGGCA GGGGGCGGGT CGCGCTGATC AGCGGTCCCG GTGCCACGGG CAAGACCGAA
CTGCTGCGGG CCGTGGCCGA TCACGTCGAC ACGGCAGGCG GGCTGGTGTT GAGCGCGGCC
TGCTCACGGG CGGAGCGGAT GCTGCCCGCC GCCGCGATGG GGCAGCTGTT CAACAGCGTG
CCGCTGCCGA CCGAGGTGAT GCGGCGCATC GGCGCGTTCA TCGACCTCGG GGCCGCCACG
ACCGAGGGCG ACGCCGACAT CAGGGCCGTG CACGTGATGT GTGTCGAACT GCTCGACATC
GCCCGGGAGC GGCCGCTCGT CCTGCTCGTC GACGACGTCG AGTTCGCCGA CGAGACCACC
CTGCGGACCC TGCTCTACCT ACAGCGCCGG CTCACCGCCG CGCAGATCCT GGTGGTCCTC
GCCGAGTCGC CGCAACCGCA GCCGTTCAAC CCCGAGTTCC GCGCCGAGCT CACCCGGCAG
GCATGTTTCT GCAACATCCA GCTGTCGCCG CTGTCCGAGG CGGGAGTCGC CGAGGTGCTC
CGTGGCTGGA CCGACGACGA GACGGCCCTG GTGCTCGCCC CGGCCTACCA CCGGATCAGT
GGCGGCAACC CGTTGCTGCT GCACGCGCTC GGCGAGGACC GGCGTGCCGC TGGGCCGACC
GACGCCACCG AAGCGATCGT CGGCGACCAG TTCCGCCAGG CGGTCCTGGC CTGCCTGCGG
CGTTGGGACC CGGCGATCCT GGAGACGGCT CACGGGCTGG CCCTGCTCGA CGACTTCGCC
ACCCCGACCC TGCTGGCCCG ACTGCTCGAC AGCAGGCCGG CCCGGGTCCA GTGGGTACTC
AACGCGCTGA CCATGTCCGG CCTGTTGGAC TCGGGGCGGT TCCGACACCC CGCGGCGCGC
GCGGCGGTGC TGCACGACCT GGACCCAGAC GCGCTGTCCA AGATGCACGC CCGCGCGGCG
GAGCTGCTGC ACTCCGAGGG CGCCCCGGCC CCGGCGATCG GGGGCCATCT GCTCGCCGCC
GGTGGTCTGG CCGAGCCGTG GGCGATCGCT CTCCTCCAGG ACGCGGCGAC GCACGCGCTC
GCCGAGGACC GGGTCGACGA CGCGGTCGAG TCGCTCAAAC TGGCCCACGA GATGTGCCAC
GATGCCCCCC GTCGGGCGGC GCTCACCGCG ATGCTGGCCG ACTGCCAGTG GCGGGTCAGC
CCGGCGGCGG TGAGCCAGCA CCTCCAGTCC CAGCGCAACG CCCTGCGGGC CGGGCACCTC
TCCGAGCGGC ACGCAGCCGG GCTGCTGCGC TACCAGCTCT GGCACGGCCA CCTGGAGGAC
GCCCAGGAGA CCCTGCGGCA CCTGCGTGAG GCCCGACACC AACTGGACGC CACGACCGCC
GCCGAGGTGG ATGGGTGCGC CGACTGGCTG CGGCTGTACT TCCCGGTCGC CTTCGCGGGG
CGTGGCGCCG CCCCCGGCGC CACGCCGGCC CTCACCCTGG CCCGCACGGA CGGCTCGTTC
GGGTGGGTCA CGCCGTCTCT GACCGCCGTG CTCACCGAGG GGGTGACCGA CGAGGTGATC
GCCCGGGCCG AGCAGGCTCT CGGCAGCCAC ATGCTGGTCG ACGTCGGCCC GGAGTCGGCG
CTGTGCGCGT TGCAGACGCT GGTCTACGCC GGCCGGACCG ACCAGGCGGT GCACTGGTGC
GACGTGCTCG GCGCGGAGGC CGGGTCCCGG GGTGCCAACA CCTGGCACGC CATCCTGTCC
GACGTCCGGT CGCACATCGC ACTCCGGCAG GGCGACCTGC CGCTCGGCGA GCGGTTCGCC
CACGAGGCCC TGGACGCGAT GTCGCCGCAC AACTGGGGCG TCGCGATCGG CTCACCGCTG
TCCAACATGC TGCTCGCCAA GATCGGCATG GACAAGCTCG ACGAGGCCAA GGCACTGCTC
AGGTACGTCA TCCCAGACGC GATGCGGGAC ACCTGGTTCT GGCCGCTGTA TCTGCGGGCC
CGGGGCCACC TGCACCTGGC CGGGGGACGG GTGCACGCCG CGCTCGCCGA CTTCGAGACC
TGCGGGCAGT TGGCCACCGA GTGGGGGATG GACCTGCCGA CCCTGCTGCC CTGGCGGGGT
GACCTGGCCC AGGTCTACCT CCGCTCCGGC CGGCCCGACA TGGCCCGGAA GATAGTGACC
GAGCAACTCT CCCGGCCCGA CGCCCAGAAT GCCCGCACCA GGGGCATCTC GCTGCGGCTG
CTCGGCTCCG CGCTCGACGT GAAGCAGCGG GTCAACACCC TGCGCCAGGC GGCCAACCTG
CTCCAGGAGT CCGGCGACCG GTTCCAGCTC GCCCTCGCCC TCACCGCCCT CAGCAGGGCG
CACTACGGCC GGGGCGAGTT CAACACCTCA CGGGTGGTGG CGCGCAGCGC CACCCAACTC
GCCAAGGACA TCCAGGCACA GGCGCTGTGC CGCCGACTGC TGCCCAGCGG CGAGGCGGCC
GGCGACGACG AGGCGGACGC CCCGCCGGAG CACGAGGAGA TGTCCCGGCT CAGCGACGCC
GAGCAGCGGG TCGCCACCCT GGCCGCGCTC GGCCACACCA ACCGAGAGAT CGGCAAGAAG
CTGTACATCA CGGTTAGCAC CGTCGAACAG CACCTCACCC GGGTCTATCG GAAGTTGAAC
GTCCGGCGCC GCACCGAACT GTCGTTGGGG CTGCCCATGG ACTCCGCCGG GGCCGGGTTG
CTGGCCGTGG CGCCGAGCAG CGCGGAGCGG CCCTGGCCGC AGTGGGACTC GGCGGCAATC
CAGGCGAGCT GA
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| Protein sequence | MGFVERSREL DILRDLYAVC ATGRGRVALI SGPGATGKTE LLRAVADHVD TAGGLVLSAA
CSRAERMLPA AAMGQLFNSV PLPTEVMRRI GAFIDLGAAT TEGDADIRAV HVMCVELLDI
ARERPLVLLV DDVEFADETT LRTLLYLQRR LTAAQILVVL AESPQPQPFN PEFRAELTRQ
ACFCNIQLSP LSEAGVAEVL RGWTDDETAL VLAPAYHRIS GGNPLLLHAL GEDRRAAGPT
DATEAIVGDQ FRQAVLACLR RWDPAILETA HGLALLDDFA TPTLLARLLD SRPARVQWVL
NALTMSGLLD SGRFRHPAAR AAVLHDLDPD ALSKMHARAA ELLHSEGAPA PAIGGHLLAA
GGLAEPWAIA LLQDAATHAL AEDRVDDAVE SLKLAHEMCH DAPRRAALTA MLADCQWRVS
PAAVSQHLQS QRNALRAGHL SERHAAGLLR YQLWHGHLED AQETLRHLRE ARHQLDATTA
AEVDGCADWL RLYFPVAFAG RGAAPGATPA LTLARTDGSF GWVTPSLTAV LTEGVTDEVI
ARAEQALGSH MLVDVGPESA LCALQTLVYA GRTDQAVHWC DVLGAEAGSR GANTWHAILS
DVRSHIALRQ GDLPLGERFA HEALDAMSPH NWGVAIGSPL SNMLLAKIGM DKLDEAKALL
RYVIPDAMRD TWFWPLYLRA RGHLHLAGGR VHAALADFET CGQLATEWGM DLPTLLPWRG
DLAQVYLRSG RPDMARKIVT EQLSRPDAQN ARTRGISLRL LGSALDVKQR VNTLRQAANL
LQESGDRFQL ALALTALSRA HYGRGEFNTS RVVARSATQL AKDIQAQALC RRLLPSGEAA
GDDEADAPPE HEEMSRLSDA EQRVATLAAL GHTNREIGKK LYITVSTVEQ HLTRVYRKLN
VRRRTELSLG LPMDSAGAGL LAVAPSSAER PWPQWDSAAI QAS
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