Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2761 |
Symbol | |
ID | 5059224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 3108746 |
End bp | 3111577 |
Gene Length | 2832 bp |
Protein Length | 943 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640475015 |
Product | regulatory protein, LuxR |
Protein accession | YP_001159581 |
Protein GI | 145595284 |
COG category | [R] General function prediction only |
COG ID | [COG3899] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.208507 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00706127 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGGATTCG TAGAGAGAAG CCGCGAGCTC GACATCTTGC GGGACCTTTA CGCCGTATGC GCCACGGGCA GGGGGCGGGT CGCGCTGATC AGCGGTCCCG GTGCCACGGG CAAGACCGAA CTGCTGCGGG CCGTGGCCGA TCACGTCGAC ACGGCAGGCG GGCTGGTGTT GAGCGCGGCC TGCTCACGGG CGGAGCGGAT GCTGCCCGCC GCCGCGATGG GGCAGCTGTT CAACAGCGTG CCGCTGCCGA CCGAGGTGAT GCGGCGCATC GGCGCGTTCA TCGACCTCGG GGCCGCCACG ACCGAGGGCG ACGCCGACAT CAGGGCCGTG CACGTGATGT GTGTCGAACT GCTCGACATC GCCCGGGAGC GGCCGCTCGT CCTGCTCGTC GACGACGTCG AGTTCGCCGA CGAGACCACC CTGCGGACCC TGCTCTACCT ACAGCGCCGG CTCACCGCCG CGCAGATCCT GGTGGTCCTC GCCGAGTCGC CGCAACCGCA GCCGTTCAAC CCCGAGTTCC GCGCCGAGCT CACCCGGCAG GCATGTTTCT GCAACATCCA GCTGTCGCCG CTGTCCGAGG CGGGAGTCGC CGAGGTGCTC CGTGGCTGGA CCGACGACGA GACGGCCCTG GTGCTCGCCC CGGCCTACCA CCGGATCAGT GGCGGCAACC CGTTGCTGCT GCACGCGCTC GGCGAGGACC GGCGTGCCGC TGGGCCGACC GACGCCACCG AAGCGATCGT CGGCGACCAG TTCCGCCAGG CGGTCCTGGC CTGCCTGCGG CGTTGGGACC CGGCGATCCT GGAGACGGCT CACGGGCTGG CCCTGCTCGA CGACTTCGCC ACCCCGACCC TGCTGGCCCG ACTGCTCGAC AGCAGGCCGG CCCGGGTCCA GTGGGTACTC AACGCGCTGA CCATGTCCGG CCTGTTGGAC TCGGGGCGGT TCCGACACCC CGCGGCGCGC GCGGCGGTGC TGCACGACCT GGACCCAGAC GCGCTGTCCA AGATGCACGC CCGCGCGGCG GAGCTGCTGC ACTCCGAGGG CGCCCCGGCC CCGGCGATCG GGGGCCATCT GCTCGCCGCC GGTGGTCTGG CCGAGCCGTG GGCGATCGCT CTCCTCCAGG ACGCGGCGAC GCACGCGCTC GCCGAGGACC GGGTCGACGA CGCGGTCGAG TCGCTCAAAC TGGCCCACGA GATGTGCCAC GATGCCCCCC GTCGGGCGGC GCTCACCGCG ATGCTGGCCG ACTGCCAGTG GCGGGTCAGC CCGGCGGCGG TGAGCCAGCA CCTCCAGTCC CAGCGCAACG CCCTGCGGGC CGGGCACCTC TCCGAGCGGC ACGCAGCCGG GCTGCTGCGC TACCAGCTCT GGCACGGCCA CCTGGAGGAC GCCCAGGAGA CCCTGCGGCA CCTGCGTGAG GCCCGACACC AACTGGACGC CACGACCGCC GCCGAGGTGG ATGGGTGCGC CGACTGGCTG CGGCTGTACT TCCCGGTCGC CTTCGCGGGG CGTGGCGCCG CCCCCGGCGC CACGCCGGCC CTCACCCTGG CCCGCACGGA CGGCTCGTTC GGGTGGGTCA CGCCGTCTCT GACCGCCGTG CTCACCGAGG GGGTGACCGA CGAGGTGATC GCCCGGGCCG AGCAGGCTCT CGGCAGCCAC ATGCTGGTCG ACGTCGGCCC GGAGTCGGCG CTGTGCGCGT TGCAGACGCT GGTCTACGCC GGCCGGACCG ACCAGGCGGT GCACTGGTGC GACGTGCTCG GCGCGGAGGC CGGGTCCCGG GGTGCCAACA CCTGGCACGC CATCCTGTCC GACGTCCGGT CGCACATCGC ACTCCGGCAG GGCGACCTGC CGCTCGGCGA GCGGTTCGCC CACGAGGCCC TGGACGCGAT GTCGCCGCAC AACTGGGGCG TCGCGATCGG CTCACCGCTG TCCAACATGC TGCTCGCCAA GATCGGCATG GACAAGCTCG ACGAGGCCAA GGCACTGCTC AGGTACGTCA TCCCAGACGC GATGCGGGAC ACCTGGTTCT GGCCGCTGTA TCTGCGGGCC CGGGGCCACC TGCACCTGGC CGGGGGACGG GTGCACGCCG CGCTCGCCGA CTTCGAGACC TGCGGGCAGT TGGCCACCGA GTGGGGGATG GACCTGCCGA CCCTGCTGCC CTGGCGGGGT GACCTGGCCC AGGTCTACCT CCGCTCCGGC CGGCCCGACA TGGCCCGGAA GATAGTGACC GAGCAACTCT CCCGGCCCGA CGCCCAGAAT GCCCGCACCA GGGGCATCTC GCTGCGGCTG CTCGGCTCCG CGCTCGACGT GAAGCAGCGG GTCAACACCC TGCGCCAGGC GGCCAACCTG CTCCAGGAGT CCGGCGACCG GTTCCAGCTC GCCCTCGCCC TCACCGCCCT CAGCAGGGCG CACTACGGCC GGGGCGAGTT CAACACCTCA CGGGTGGTGG CGCGCAGCGC CACCCAACTC GCCAAGGACA TCCAGGCACA GGCGCTGTGC CGCCGACTGC TGCCCAGCGG CGAGGCGGCC GGCGACGACG AGGCGGACGC CCCGCCGGAG CACGAGGAGA TGTCCCGGCT CAGCGACGCC GAGCAGCGGG TCGCCACCCT GGCCGCGCTC GGCCACACCA ACCGAGAGAT CGGCAAGAAG CTGTACATCA CGGTTAGCAC CGTCGAACAG CACCTCACCC GGGTCTATCG GAAGTTGAAC GTCCGGCGCC GCACCGAACT GTCGTTGGGG CTGCCCATGG ACTCCGCCGG GGCCGGGTTG CTGGCCGTGG CGCCGAGCAG CGCGGAGCGG CCCTGGCCGC AGTGGGACTC GGCGGCAATC CAGGCGAGCT GA
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Protein sequence | MGFVERSREL DILRDLYAVC ATGRGRVALI SGPGATGKTE LLRAVADHVD TAGGLVLSAA CSRAERMLPA AAMGQLFNSV PLPTEVMRRI GAFIDLGAAT TEGDADIRAV HVMCVELLDI ARERPLVLLV DDVEFADETT LRTLLYLQRR LTAAQILVVL AESPQPQPFN PEFRAELTRQ ACFCNIQLSP LSEAGVAEVL RGWTDDETAL VLAPAYHRIS GGNPLLLHAL GEDRRAAGPT DATEAIVGDQ FRQAVLACLR RWDPAILETA HGLALLDDFA TPTLLARLLD SRPARVQWVL NALTMSGLLD SGRFRHPAAR AAVLHDLDPD ALSKMHARAA ELLHSEGAPA PAIGGHLLAA GGLAEPWAIA LLQDAATHAL AEDRVDDAVE SLKLAHEMCH DAPRRAALTA MLADCQWRVS PAAVSQHLQS QRNALRAGHL SERHAAGLLR YQLWHGHLED AQETLRHLRE ARHQLDATTA AEVDGCADWL RLYFPVAFAG RGAAPGATPA LTLARTDGSF GWVTPSLTAV LTEGVTDEVI ARAEQALGSH MLVDVGPESA LCALQTLVYA GRTDQAVHWC DVLGAEAGSR GANTWHAILS DVRSHIALRQ GDLPLGERFA HEALDAMSPH NWGVAIGSPL SNMLLAKIGM DKLDEAKALL RYVIPDAMRD TWFWPLYLRA RGHLHLAGGR VHAALADFET CGQLATEWGM DLPTLLPWRG DLAQVYLRSG RPDMARKIVT EQLSRPDAQN ARTRGISLRL LGSALDVKQR VNTLRQAANL LQESGDRFQL ALALTALSRA HYGRGEFNTS RVVARSATQL AKDIQAQALC RRLLPSGEAA GDDEADAPPE HEEMSRLSDA EQRVATLAAL GHTNREIGKK LYITVSTVEQ HLTRVYRKLN VRRRTELSLG LPMDSAGAGL LAVAPSSAER PWPQWDSAAI QAS
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