| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2759 |
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| Symbol | |
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| ID | 5059222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 3105244 |
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| End bp | 3107808 |
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| Gene Length | 2565 bp |
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| Protein Length | 854 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640475013 |
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| Product | hypothetical protein |
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| Protein accession | YP_001159579 |
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| Protein GI | 145595282 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.732322 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0170519 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTACC TCGCGTGGCG CACCTTGCGC TACCGCAGGC TCGCGTTCAT GGCGACCTTC
GTCGCGGTCT TCTTCGGCGT GGCGCTGATT GTCGCCTGCG GCGGGCTGAT GGAGACCGGT
GTCCGGATGG CGGTCCCGCC ACAGCGGCTG GCGGCGGCCG ACGTCGTGGT GAGCGGCAAG
CAGACCTATG GCGTGCCCAA CAAGGACCCG CAGGACACCA AGAACATCAA GTCGGTCCCA
CTGGCCGAGC GGTACTGGAT CGATCCGGCG TTGGTCAGCA AGATTCAGGG GGTGCCCGGG
GTCGAACGGG CCGTCGCCGA GTCGTCCTTC GCCGCCACTG TCGTCCGTGA CGGCGCTCCG
GTGATCGTCG GGACCACGTC GCTGGGCCAC AGCTGGGAGT CGGCCGAGCT CGGGCCGTAC
AAGCTTGATG GGAAGCCACC CACCCGGGCC GGTCAGGTCG TCCTGGACCG GGCGGTGGCG
CGGCTGGCGC GGGTCGGGAT CGGTGACCGG GTCGACGTCG TGGCCGGCGG CACCACCTCC
TCCTTCCAGG TGACCGGCAT CGCCGATCCT CCGGGCGAGA TGAGCCAGTC GGCGCTCTTC
TTCTCCGGCG ACGACGAGCG GCGGCTCAAC CCGCATGCGG GCAGCGCCGA CGCGATCGGT
GTGCTGGCGA AGCCCGGCAC CGACGTGGAG GCGCTGCGCG GCCGGATCGA GCAGACCCTC
GCCGACCGTA AGCTGGTGGT GCTCACCGGC GACGACCGTG GGGCGGCCGA GTTCCCCGCG
GCGATCGGCG GGCAGGCGCA GCTCATCCCG CTCGCCGGCG TTTTCGCCGG GATGACGGTC
TTCGTGGCGA TCTTCGTGAT CGCCAGCACC CTGGGCCTGT CGGTGCAGCA GCGGCAGAAG
GAGATCGCCC TGCTGCGGTC CATCGGCGCG ACGCCGCGGC AGATCCGCAC GATGGTGCGC
CGCGAGGCAC TCGTGGTCGC GGTCGGTGCG GCGATCCTCG GCTGTGTCCC CGGGGTGTTC
CTGGGCCCGC TGCTCTACCA CCTGGTCTCG GAGGCCGGGG TCATCTCGCC GGTGGTCACG
TTCCACCAGG GCTTCATCCC CTATCTCGCC GCGCCCGCCA TCGGGATCTT CGCCGCGCTG
GTGGCCGCCT ACGTCGCCGG TCGACGCCCG TCCAAGACTC GCCCGACCGC TGGCATCGCC
GAAGCCACCC TCCAGCGCAA GTGGGTCAGC TGGCCCCGGG TGGTGCTGTC CCTCCTCTTC
TTCGCCGGCG GGTTCGCGTT GATCCTGGTG ACGGCGATCG TGATGGAGGG CGCGGTGGCC
TCGGCCACCG CCGGGCCGGC GGTGATGTGT TGGGCGATCT CGATTGCGTT GATCAGCCCG
GGGCTGACCC GGCTTCTCGC GGCCGTACTG AGCCCGCCGG TGCGGGCGTT CTTCGGGCTC
GCCGGCTATC TCGGCACGAT AAACGTGCGG ACACGGGCGG TCCGGGTGGC CGCCGCGGTC
ACCCCGATCA TGCTGGCGGT GGCGTTGGCG GTGGCCAACT TCTACCTCCA GACCACCCAG
AACGAGGCCG CCGAGCGCTA CTACTCCGAC AACCTTCGTG CCGACGTGGT GCTCAGCTCC
ACCACCGGTG GGTTCCCCGC CGACACCGTC GAGGCGATCC GTTCCGCGCC CGGTGTCGAG
GCGGCGTCCG CGTACGTCAC CAGCGCCGGA TGGATCAACA AGCCGTACGA CGGCTCGCAC
GTTGAGTCGC CGTGGCCGTT GCAGGGCGTG AGCGGGGCCA GCGCCGCCAG CATCACCGGC
GTACAGACCG TCGCCGGTAA CCTGGGCGAC CTCACCGGCG ACACGGTGGC ACTGCCCGAG
GTCGCCGGGA AGAACCTCAA CGTCGGTGTC GGCGACCAGA TCACCCTACG GCTCGGTGAC
CGGTCGGCGG TGGACCTGCG GGTGGTGGCG CTCTACCCGG CCAAGGAGGG ATTCGAGACG
ATCCTGCTCC CCGCCGACCT GCTCGCCGCG CACAGCACCA CCGGACTGTC CCGACAGATC
CTCGTCACCG CCGCGCCCGG CACCGACCGG GACGCGTTGG CGGCCAATCT GCGGGAGAAG
GTCGCCGACC ACCCCGGCAC CATGATCGAG GGACGCGAGG CGATCACCAC CTTCGCCGAA
CGCACCAAGA CCCTGGCATG GGTCAACTAT CTGCTCGTCG CGCTGGTCGC CGGCTACACC
ATGATCGCGG TGGCGAACAC CCTGATTGTG GCGACCGCCG GTCGCCGCCA GGAGCTGGGC
ATGCAGCGCC TCATCGGTGC CACCCGGCGG CAGTCCCTGC TGATGCTCAG CGTGGAGGCG
GGCATGGTCG CCGTCATCGG GGTGGTGCTC GGCACCATCG CCTCTATCGC CACCCTGATG
CCGTTCAGCA TCGTGGTGCT GGGGCGACCG GTACCCTCCG GGCCATTCTG GATCTACCTG
GCCGTGGTGG GGGGCGCCAC GCTGCTCGCC TTCGCCGCCA CCCTGCTGCC CGGACGCCGG
GTGATGCTCG TTCGGCCGGC GGAAGCCGCC GTCGCCGTGG AATAG
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| Protein sequence | MMYLAWRTLR YRRLAFMATF VAVFFGVALI VACGGLMETG VRMAVPPQRL AAADVVVSGK
QTYGVPNKDP QDTKNIKSVP LAERYWIDPA LVSKIQGVPG VERAVAESSF AATVVRDGAP
VIVGTTSLGH SWESAELGPY KLDGKPPTRA GQVVLDRAVA RLARVGIGDR VDVVAGGTTS
SFQVTGIADP PGEMSQSALF FSGDDERRLN PHAGSADAIG VLAKPGTDVE ALRGRIEQTL
ADRKLVVLTG DDRGAAEFPA AIGGQAQLIP LAGVFAGMTV FVAIFVIAST LGLSVQQRQK
EIALLRSIGA TPRQIRTMVR REALVVAVGA AILGCVPGVF LGPLLYHLVS EAGVISPVVT
FHQGFIPYLA APAIGIFAAL VAAYVAGRRP SKTRPTAGIA EATLQRKWVS WPRVVLSLLF
FAGGFALILV TAIVMEGAVA SATAGPAVMC WAISIALISP GLTRLLAAVL SPPVRAFFGL
AGYLGTINVR TRAVRVAAAV TPIMLAVALA VANFYLQTTQ NEAAERYYSD NLRADVVLSS
TTGGFPADTV EAIRSAPGVE AASAYVTSAG WINKPYDGSH VESPWPLQGV SGASAASITG
VQTVAGNLGD LTGDTVALPE VAGKNLNVGV GDQITLRLGD RSAVDLRVVA LYPAKEGFET
ILLPADLLAA HSTTGLSRQI LVTAAPGTDR DALAANLREK VADHPGTMIE GREAITTFAE
RTKTLAWVNY LLVALVAGYT MIAVANTLIV ATAGRRQELG MQRLIGATRR QSLLMLSVEA
GMVAVIGVVL GTIASIATLM PFSIVVLGRP VPSGPFWIYL AVVGGATLLA FAATLLPGRR
VMLVRPAEAA VAVE
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