Gene Strop_2631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2631 
Symbol 
ID5059094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2953608 
End bp2954369 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content68% 
IMG OID640474887 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001159453 
Protein GI145595156 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.161371 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.29273 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGCGGC TGGACGACAA GGTGGCGCTC ATCACCGGCG GTGCGCGCGG CATGGGCAAA 
GCACATGCCC GGCAGTTCGT CGCCGAGGGC GCCCGAGTGG TCATCGGCGA CATACTCGAC
GACCGGGGTG CGGCTGTCGC CGATGGTCTC GGTAATGATC ATTGCCGCTA CGTGCACCAC
GATGTCACCA GCGAGCACGA GTGGGCTGCT GCGGTCGCCA CCACGCTGGC GGCGTTCGGC
CGACTCGACG TGCTGGTCAA CAACGCCGGC ATCTTCCGGC ACGCAGCGAT CACCACGATG
GATCCGGCCG AGTTCCGACA TGTGATCGAC GTCAACCTGA CGGGCAGTTG GCTCGGCATC
CACGCTGCGG CGCCGGCGAT GACGACGGTC GGCGGTGGAT CGATCGTGAA CGTGTCCTCG
ATCGAGGGGT TCGTCGGCGC GGCCGGCCTC TCGGCCTACA GCGCCACCAA GTTCGGGATC
CGCGGCATCA CAAGGTCCGC GGCGCAGGAG CTCGGGCCCG CCGGCATCCG GGTCAACTCG
GTTCATCCCG GCGGCGTGAT GACCTCGATG GCGCTGGCCG CCGCCGAAAC CATGCCCGCG
GTCGATTCGG ATGCATTCCT CAATTCGCTG CCGATCGCCC GCTTCGCCGA GCCGGTGGAG
ATCTCCCGAC TGGTGGCGTT CCTCGCCTCG GACGAGTCGT CATACACCAC GGGTGCCGAG
TTCGTGGCCG ACGGCGGGCT CCTTTCCGGA CCGGGATACT AA
 
Protein sequence
MGRLDDKVAL ITGGARGMGK AHARQFVAEG ARVVIGDILD DRGAAVADGL GNDHCRYVHH 
DVTSEHEWAA AVATTLAAFG RLDVLVNNAG IFRHAAITTM DPAEFRHVID VNLTGSWLGI
HAAAPAMTTV GGGSIVNVSS IEGFVGAAGL SAYSATKFGI RGITRSAAQE LGPAGIRVNS
VHPGGVMTSM ALAAAETMPA VDSDAFLNSL PIARFAEPVE ISRLVAFLAS DESSYTTGAE
FVADGGLLSG PGY