| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2631 |
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| Symbol | |
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| ID | 5059094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 2953608 |
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| End bp | 2954369 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640474887 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001159453 |
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| Protein GI | 145595156 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.161371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.29273 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCGGC TGGACGACAA GGTGGCGCTC ATCACCGGCG GTGCGCGCGG CATGGGCAAA
GCACATGCCC GGCAGTTCGT CGCCGAGGGC GCCCGAGTGG TCATCGGCGA CATACTCGAC
GACCGGGGTG CGGCTGTCGC CGATGGTCTC GGTAATGATC ATTGCCGCTA CGTGCACCAC
GATGTCACCA GCGAGCACGA GTGGGCTGCT GCGGTCGCCA CCACGCTGGC GGCGTTCGGC
CGACTCGACG TGCTGGTCAA CAACGCCGGC ATCTTCCGGC ACGCAGCGAT CACCACGATG
GATCCGGCCG AGTTCCGACA TGTGATCGAC GTCAACCTGA CGGGCAGTTG GCTCGGCATC
CACGCTGCGG CGCCGGCGAT GACGACGGTC GGCGGTGGAT CGATCGTGAA CGTGTCCTCG
ATCGAGGGGT TCGTCGGCGC GGCCGGCCTC TCGGCCTACA GCGCCACCAA GTTCGGGATC
CGCGGCATCA CAAGGTCCGC GGCGCAGGAG CTCGGGCCCG CCGGCATCCG GGTCAACTCG
GTTCATCCCG GCGGCGTGAT GACCTCGATG GCGCTGGCCG CCGCCGAAAC CATGCCCGCG
GTCGATTCGG ATGCATTCCT CAATTCGCTG CCGATCGCCC GCTTCGCCGA GCCGGTGGAG
ATCTCCCGAC TGGTGGCGTT CCTCGCCTCG GACGAGTCGT CATACACCAC GGGTGCCGAG
TTCGTGGCCG ACGGCGGGCT CCTTTCCGGA CCGGGATACT AA
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| Protein sequence | MGRLDDKVAL ITGGARGMGK AHARQFVAEG ARVVIGDILD DRGAAVADGL GNDHCRYVHH
DVTSEHEWAA AVATTLAAFG RLDVLVNNAG IFRHAAITTM DPAEFRHVID VNLTGSWLGI
HAAAPAMTTV GGGSIVNVSS IEGFVGAAGL SAYSATKFGI RGITRSAAQE LGPAGIRVNS
VHPGGVMTSM ALAAAETMPA VDSDAFLNSL PIARFAEPVE ISRLVAFLAS DESSYTTGAE
FVADGGLLSG PGY
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