Gene Strop_2613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2613 
Symbol 
ID5059076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2934254 
End bp2935417 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content70% 
IMG OID640474869 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_001159435 
Protein GI145595138 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTACTC CGGTGATCGT TGACGCGGTT CGCACGCCGA TCGGCAAACG CGGCGGCTGG 
CTGGCGGGGC TGCACGCCGC CGAGCTACTC GGCGCGGCAC AACGCGCCCT CGTCACCCAC
GCGGACCTCG ACCCGGACGC GGTCGAGCAG GTCATCGGCG GGTGCGTCAC CCAGGGCGGC
GAGCAGTCCA ACAACATCAG CCGCACCGCT TGGCTTCACG CCGGCCTGCC ATACCGGACG
GGCTGCCTCA CCATCGACGC CCAGTGTGGG TCGTCGCAGC ACGCCGCTCA TCTGGTCGCC
GGTCTCATCG CCACCGACGC CATCGAGGTC GGCATCGCCT GTGGTGTCGA GGCGATGAGT
CGGGTACCTC TGCGCGCGAA TCTCGGCGTC CACGCCGGCA CACCCCGGCC GGCCTCGTGG
GACCTCGACC TACCTAACCA GTATGTCGCC GCCGAACGGA TCGCCGTCCG GCGTGGACTG
TCCCGCACGG CGGTGGACGA GTTCGGCGTA CGCTCACAGG CAAAGGCAGC CCAGGCGTGG
GCACAGCGGC ACTACGACCG AGAGGTCGTA CCCGTGACGG CGCCGGTTCT CGACGCCGAG
GGACAGCCGA CCGGCGAAAC CCGCACGGTG GAGCGGGACC AGGGCCTGCG GGACACCACC
CTGGTGGCCC TGAACCGACT GCGACCGGTG GTCGAGGGTG GGCTGCACAC CGCCGGCACC
TCGTCACAGA TCTCCGACGG CGCCGCGTCG GTATTGTTGA TGGAGGCCGA TCGAGCTCGC
GCGCTCGGTC TCCGCCCAAG GGCCAGGATC GTCGCCCAGT GCCTGGTCGG CGCCGAGCCC
TACTACCACC TGGACGGCCC CGTGCAGGCG ACCGAACGCG TGCTGGCCCG CGCCGGAATG
AAGATCGAGG ATATCGATCG GTTCGAGGTC AACGAGGCGT TCGCCGCCGT CGTGCTGTCC
TGGCTGTCGG TGCACCGCGC CGACCCGGAG AAGGTGAACG TCAACGGTGG CGCGATCGCC
CTCGGGCATC CGGTGGGCAG CACCGGGGCC CGACTGCTCA CCACCGCCCT ACACGAGTTG
GAACGCACCG CCTCGCGCAC AGCACTGATC ACGATGTGCG CCGGTGGGGC CATGTCCACC
GCGACCATCA TTGAGCGCCT CTGA
 
Protein sequence
MGTPVIVDAV RTPIGKRGGW LAGLHAAELL GAAQRALVTH ADLDPDAVEQ VIGGCVTQGG 
EQSNNISRTA WLHAGLPYRT GCLTIDAQCG SSQHAAHLVA GLIATDAIEV GIACGVEAMS
RVPLRANLGV HAGTPRPASW DLDLPNQYVA AERIAVRRGL SRTAVDEFGV RSQAKAAQAW
AQRHYDREVV PVTAPVLDAE GQPTGETRTV ERDQGLRDTT LVALNRLRPV VEGGLHTAGT
SSQISDGAAS VLLMEADRAR ALGLRPRARI VAQCLVGAEP YYHLDGPVQA TERVLARAGM
KIEDIDRFEV NEAFAAVVLS WLSVHRADPE KVNVNGGAIA LGHPVGSTGA RLLTTALHEL
ERTASRTALI TMCAGGAMST ATIIERL