Gene Strop_2601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2601 
Symbol 
ID5059064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand+ 
Start bp2920344 
End bp2921018 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content67% 
IMG OID640474857 
Productregulatory protein, TetR 
Protein accessionYP_001159423 
Protein GI145595126 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.354794 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACAA AGAAAGCCAG TAGCACGAGC CTGCCGTCGG AGCGTCGCAA CCACCTCGTA 
CGCCTCGCCG GGGAGCTGTT CGCCGAGAAG GGCTTCCGGG CCACCACCGT GCGTGAGATC 
GCCGACGCGG CAGGCATCCT CTCCGGTAGC CTCTACCACC ACTTTGACTC CAAGGAGTCG 
ATCGGGGACG AGATCCTGTC CGGCTTCCTC AACGAGGTGC TCGCCGGATA CCGCGAGGCG 
GTCGCCGAAC CAGACGACCC GCGCAGCACG ATCGAGCAGT TCGTGCGCTC CAGCACAGCG 
ACGCTGGCCC GGCATCGCGC CGCCCTGACG ATGCTGCAGA ACGACTGGAG CCACTTCCGC 
GCCATGCCCC GCTTCGACTA CCTGCGTACC GCCACCCGGG AGATCGAACA CCTCTGGGTC 
GACCAGTTAG AGCGAGGGAA GCAGAGTGGT CTGTTCCGCT CCGACCTGGA CGCCAAGCTG 
ACCTACCGAC TACTGCGGGA CGTGTTGTGG ATCCCGACCC GGTGGGGGCA GAACGGCAGC 
AACAGCTGGG ATGGCGACCA GATCGCCGAC GCGGTCCTCC GCCTGATCTT CGATGGCATC 
CTCGCTCCGG GCAACAGCTC GTCTGGGGCG TCGCGGGCGG ATCGCTCGCG TCGGGCGAAG 
CCGGCAGGAA GCTGA
 
Protein sequence
MTTKKASSTS LPSERRNHLV RLAGELFAEK GFRATTVREI ADAAGILSGS LYHHFDSKES 
IGDEILSGFL NEVLAGYREA VAEPDDPRST IEQFVRSSTA TLARHRAALT MLQNDWSHFR 
AMPRFDYLRT ATREIEHLWV DQLERGKQSG LFRSDLDAKL TYRLLRDVLW IPTRWGQNGS 
NSWDGDQIAD AVLRLIFDGI LAPGNSSSGA SRADRSRRAK PAGS