Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2572 |
Symbol | |
ID | 5059035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2892899 |
End bp | 2893429 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640474828 |
Product | Sulfate transporter/antisigma-factor antagonist STAS |
Protein accession | YP_001159394 |
Protein GI | 145595097 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.149516 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTCG TGCCAGACGA CAACATGATG ACCCTGATCT GCGATGGCTG CGGGGAGACC GCCGCCAGCA CGGCGGTTGT CCTACCCGAC GACGAAGTGG TCTGGACACT CGTGTCCGAG CACGGCTGGA GCGGATCTCC GTTTGCCACC GGTCCACACC GGTGCGCCGG GTGCACCCCA TCCCCGCCCG GCCGAGCCAC CCCCGCTCAG CCACTCGGGG TTCCCGACCA CAGCGAGGTC GTCGAGGCCA CCGCGGCGAC GCCGGACCCG CTGCGTACGG CGTTGGACGA GGCCATCGAG CACGAGGGAC GCGTGGTCGT TGACCTCTCC GCCGTTGAGC AGATCGACTC CGTCGGCCTC GGCTTGCTCG TCCGGGCGCG GCAGGAGGCT CGCCAGCGCG GCGCGGAGCT GTGCCTCCAC GCGCCCTCCC GGTTCGTGTT GACCGTGCTG CACACGATGC GCCTGGACGC CGCGTTCCCC GTCGTCACCG ACCATCCAGA CGCGACGAAC CAACCCAAGG TGCTGGTGTG A
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Protein sequence | MTVVPDDNMM TLICDGCGET AASTAVVLPD DEVVWTLVSE HGWSGSPFAT GPHRCAGCTP SPPGRATPAQ PLGVPDHSEV VEATAATPDP LRTALDEAIE HEGRVVVDLS AVEQIDSVGL GLLVRARQEA RQRGAELCLH APSRFVLTVL HTMRLDAAFP VVTDHPDATN QPKVLV
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