Gene Strop_2572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2572 
Symbol 
ID5059035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2892899 
End bp2893429 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content70% 
IMG OID640474828 
ProductSulfate transporter/antisigma-factor antagonist STAS 
Protein accessionYP_001159394 
Protein GI145595097 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.149516 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCG TGCCAGACGA CAACATGATG ACCCTGATCT GCGATGGCTG CGGGGAGACC 
GCCGCCAGCA CGGCGGTTGT CCTACCCGAC GACGAAGTGG TCTGGACACT CGTGTCCGAG
CACGGCTGGA GCGGATCTCC GTTTGCCACC GGTCCACACC GGTGCGCCGG GTGCACCCCA
TCCCCGCCCG GCCGAGCCAC CCCCGCTCAG CCACTCGGGG TTCCCGACCA CAGCGAGGTC
GTCGAGGCCA CCGCGGCGAC GCCGGACCCG CTGCGTACGG CGTTGGACGA GGCCATCGAG
CACGAGGGAC GCGTGGTCGT TGACCTCTCC GCCGTTGAGC AGATCGACTC CGTCGGCCTC
GGCTTGCTCG TCCGGGCGCG GCAGGAGGCT CGCCAGCGCG GCGCGGAGCT GTGCCTCCAC
GCGCCCTCCC GGTTCGTGTT GACCGTGCTG CACACGATGC GCCTGGACGC CGCGTTCCCC
GTCGTCACCG ACCATCCAGA CGCGACGAAC CAACCCAAGG TGCTGGTGTG A
 
Protein sequence
MTVVPDDNMM TLICDGCGET AASTAVVLPD DEVVWTLVSE HGWSGSPFAT GPHRCAGCTP 
SPPGRATPAQ PLGVPDHSEV VEATAATPDP LRTALDEAIE HEGRVVVDLS AVEQIDSVGL
GLLVRARQEA RQRGAELCLH APSRFVLTVL HTMRLDAAFP VVTDHPDATN QPKVLV