Gene Strop_2501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2501 
Symbol 
ID5058964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2811556 
End bp2811963 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content72% 
IMG OID640474759 
Productcupin 2 domain-containing protein 
Protein accessionYP_001159325 
Protein GI145595028 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.342935 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGC AGTTCCCCGG GCGGGTGGCC GCGGCGGACG TGGCCGCCGA CACCCGCCGC 
GGCGGCGAGC TGCGGGTGCT GCTCGGTCCG CGTACTGTCG GCAGCACCTC CGGGTTTATG
GGCGTGGCGA CACTGCGCCC CGGGGAGCGG ATCGCCGAGC ACTACCACCC CTACAGCGAG
GAGTTCCTCT ACGTCGCCCG GGGCACCATC ACCGTTGACC TGGACGACAC GCCGGTCCCG
CTGGCGGCCG GCGAGGCCCT CCTCGTCCCG ATCAATGTCC GGCATCGACT GCGCAACACC
GGCACCGCGG ACGCCGAGGT CGTGTTCCAC CTCGGTCCGC TTGCCCCGCG CCCCGAACTG
GGTCACGTCG ACACCGAACT CGTCACGCAA CGGGGCGGTG GGTCGTGA
 
Protein sequence
MSEQFPGRVA AADVAADTRR GGELRVLLGP RTVGSTSGFM GVATLRPGER IAEHYHPYSE 
EFLYVARGTI TVDLDDTPVP LAAGEALLVP INVRHRLRNT GTADAEVVFH LGPLAPRPEL
GHVDTELVTQ RGGGS