Gene Strop_2457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2457 
Symbol 
ID5058920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2762744 
End bp2763283 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content64% 
IMG OID640474715 
Producthypothetical protein 
Protein accessionYP_001159281 
Protein GI145594984 
COG category[S] Function unknown 
COG ID[COG3544] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.10169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGGCT GTGGCACCTC GTCCAGCACG TCGGAACCCC CTGCACCGAC CTCCGAAGCC 
GTCCAGGTCA GCACCACCCA CAACGCCGCC GATGTGATGT ACCTACAGAT GATGATCGCC
CACCACGGGC AGGGCCTGGA GCTCGTCCAG CTGGCTGGAA CCCGTGCGCA ACAGGAAGAG
ATCAAGACAC TTGCCGCTGC CGTCCAGGCC ACCCAGGACG ACGAGGTCAC CATGATGAGA
TCGTGGCTCG ACACCTGGTC GAAACCGGCA GCGGTCGACC ATGACCCGGC CGCGCATGCT
GAGCACGGTG GTTTGCCAGC TACCGGGCCC GAGCAGATCG CCGCGCTGCG GGACGCAACG
GTGACCGACT TCGACCGGAG TTTCATCAAC CTCTTCGTCG CCCACCAGCA CAACGCGGTC
GAGATATCCC AGTGGGAGGA GGAAAGGGGG AAAAACCCGG AAGTCAGGGA TTTCGCCCGC
AGGGTTCGGG AATCCCGTGC CGACCAGATC GCACAGATGC TGGCGTACCT CAACAGCTGA
 
Protein sequence
MAGCGTSSST SEPPAPTSEA VQVSTTHNAA DVMYLQMMIA HHGQGLELVQ LAGTRAQQEE 
IKTLAAAVQA TQDDEVTMMR SWLDTWSKPA AVDHDPAAHA EHGGLPATGP EQIAALRDAT
VTDFDRSFIN LFVAHQHNAV EISQWEEERG KNPEVRDFAR RVRESRADQI AQMLAYLNS